Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0738 ATGGCAGCATGTTGTCCAAGTTGCTCCAAGTTCACACCAAGTTCTTTTCTTCCACACTCCTCTCTTGTTCCCTCTTTTTTCGGTGTCCCTTCTAGCTATGTGAGGTCTGTTAATGTCCGTTGTTTCTATAAGTGTCAAAGAGTTTGGCTTCGGTCAAGCCGTCGTTTTGTTCCTCTACTTGCTTCGTCGTGCAGCAATTTTGAGTCTGTGGAACTGCAAGAAGCCCAGAATGCTGTTTCAAAACTTCTTCGAGAATTCGGGGTGTCTGAGGAGGAATCTAATTCTATTGCATCTAATTCACCGAAGTATGTGAGGATGCTGGTTGATGAAGTACGGGATTTGGACGAACTTTCAATGTGGGAGACGCAAATTGGCGGGTTCCAGGAGAAAGTGGTTCACATTGCTAGGAAGAAAGGTGATAATGGCAAAGTTGTATACTTGGAGAGTCTGGGTTTGAGCCTCTCTTCAGCTATGAACGTGGCCAGATATCTGTCAGGAGAAACACTTGTAGCACTCATCCATAAGGTTAAGTGTATGAAGGAACTGTTCTTTTCTGGCAGTGAAAGTTATGAGTTCCCGGTCAGAAGAGTTCGCAATATGATGATGCAGTTATCTATTCCTATTGATGAAGATCTGCAGCAGACTTTGTCCTTTTTTGAAAAGGTTGAAGCAAGGCGTGGAGGTTTGACCATGTTGAATTCCAGTGATGCTGCTTTTGATTTTTTAATTGAATCATTTCCCCGTCTACTTTTGTTATCAGTAAAATCTCACATGAAACCGTTAGTGGAATTTCTTGAGAGTGTTGGAATCCAAAGAGATCTCATGAGAAATATACTGTTGACTTTTCCTCCCTCTTTGCTGTGGAATATTGAAGTATTTAAAAGTCGAATACTAGCCTTGAATGAGATTGGTGGTGTAAATAACAATCATGTTAAGTTGCTGATAAAATATCCATGGATATTATCAAAAAGCATTCAAGACAACTATAAGGAAATCCTCTCTTTGTTTGATTCGGAGAAGGTTCCCAAGGCATTTGTTGATCATGCAATCAAAAGCTGGCCCCATATCCTGGGCTGTTCATCTAGCAAGCTAAAGCTGATGGTTGATCAGTTTGGTGAGATAGGAGTTCAACAGAAGAAGTTAGGTCAAGTTATTGCTAAAAGTCCTCAGCTACTGTTGCAGAAGCCACAAGACTTTCTCCAGGTTCAGCTTCCTTCTAGTTCAACTATAGTATGGAAATCCAGGTCAAACCGCCTAGTTGAACTGGTTGTTCTGTTCTTTGAAAATATGGGGTTTGATAGACAAACAATTGGGAAAATACTGGTTCGCTGCCCTGAAATCTTTGCTGCTTGCCCTGCCAAGACTCTCAAGAGAAAGATTGAGTTCCTCCATAGTATTGGTGTTTCTGAAGTTCACCTTCCTCGGGTCATAAAAAAGTATCCAGAACTTCTTGTGTCCGATCCAGACAGAACCATGCTACCTAGGTTGGTGTACTTGATGAAGTTAGGACTATCTGAAAGAGACATTGCATTGATGGTACGATCATTTTCTCCTCTGCTTGGATACAGCATTGAGGAGGTTCTGAGACCCAAAGCAGAATTTCTGGTGAACACAATGGAGAGGCCAGTGAAGGACGTGGTGGGATACCCCAGGTAA 1656 0.4197 MAACCPSCSKFTPSSFLPHSSLVPSFFGVPSSYVRSVNVRCFYKCQRVWLRSSRRFVPLLASSCSNFESVELQEAQNAVSKLLREFGVSEEESNSIASNSPKYVRMLVDEVRDLDELSMWETQIGGFQEKVVHIARKKGDNGKVVYLESLGLSLSSAMNVARYLSGETLVALIHKVKCMKELFFSGSESYEFPVRRVRNMMMQLSIPIDEDLQQTLSFFEKVEARRGGLTMLNSSDAAFDFLIESFPRLLLLSVKSHMKPLVEFLESVGIQRDLMRNILLTFPPSLLWNIEVFKSRILALNEIGGVNNNHVKLLIKYPWILSKSIQDNYKEILSLFDSEKVPKAFVDHAIKSWPHILGCSSSKLKLMVDQFGEIGVQQKKLGQVIAKSPQLLLQKPQDFLQVQLPSSSTIVWKSRSNRLVELVVLFFENMGFDRQTIGKILVRCPEIFAACPAKTLKRKIEFLHSIGVSEVHLPRVIKKYPELLVSDPDRTMLPRLVYLMKLGLSERDIALMVRSFSPLLGYSIEEVLRPKAEFLVNTMERPVKDVVGYPR 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0738 551 Coils Coil 72 92 - -
Prci7g0738 551 SMART mt_12 474 505 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 SMART mt_12 510 542 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 SMART mt_12 438 469 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 SMART mt_12 311 342 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 SMART mt_12 347 377 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 SMART mt_12 240 271 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 SMART mt_12 382 433 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 PANTHER CGI-12 PROTEIN-RELATED 349 551 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 Pfam mTERF 77 297 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 Pfam mTERF 262 551 IPR003690 GO:0003690|GO:0006355
Prci7g0738 551 Gene3D Transcription termination factor 3, mitochondrial 408 551 IPR038538 -
Prci7g0738 551 Gene3D Transcription termination factor 3, mitochondrial 227 407 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0738 Prci-Chr7 25073767 25080646 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Prci7g0738 mTERF 1.2e-73 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0738 K15031 - qsa:O6P43_022473 614.379