Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0736 ATGAAACCGAGAGACTCAGAAATAATGTTTCCAGAAGAGCAAGATGATGATGGAGAGAGAGAGTTCGGTGGAGGAACATACATAAAGAAAGGACCATGGAGTGCTGAAGAAGATGAGATTCTGATGAGACATGTCAAGAAAAACGGTCCAAGAGATTGGAGCTCCATTCGGTCCAAAGGGTTGCTTCCTCGGACCGGAAAATCATGCCGGCTTCGATGGGTTAACAAGCTTAGGCCAAACTTGAAGACAGGGTGCAAGTTCTCGGCAGAGGAAGAAAGAGTGGTGATAGAATTGCAGGCACAGTTTGGGAACAAGTGGGCCAAAATAGCAACATACTTAGAAGGAAGAACAGACAATGATGTCAAGAATTTCTGGAGTAGCAGAAGAAAGAGGTTGGAGAGAATGTTACAGAAACCATCTCCATCATCAAAGCCACTTAAGAATAACAAAGCAACAAAAAAAGCTCATATTCATCATCGTAATCTACCACAATTTGAAGAGGTTCCTTCATGCAGTTCAAATCATCTGGAGGAAAACCCATCGGAGAAATTTCAGAATCTGGAAGCACAGGAGGCCATTCCACTACACATGGTTCCATCATTTGAGTCTTCATTAGAGTACTACACATTTTCTCAAGTACTTCCCACTGAGTCCCACCAAGTGGACTATGGCCTCTTGCTGCCGGTCTGCCATGGCCTGATTGATCCAGAGCCATTCGATGCTGTCTTTTTTGATGTTTTCGAACAGCACAAGGTTCCAGAATATGTGTGCAGCAGCAGCAGCAGCAAGAAAGGTGAGAGCAGATTGCCATGTCTTGCATTGGGAGGAATTGCTCAGAGTTCAACCCCAGCAAGTGGCCTCTTTGAGGACTTCCCAAGTGAGATATTTGACTATTTTGAAGACATTCCAGCTTCATTAGAGAAATGA 927 0.4412 MKPRDSEIMFPEEQDDDGEREFGGGTYIKKGPWSAEEDEILMRHVKKNGPRDWSSIRSKGLLPRTGKSCRLRWVNKLRPNLKTGCKFSAEEERVVIELQAQFGNKWAKIATYLEGRTDNDVKNFWSSRRKRLERMLQKPSPSSKPLKNNKATKKAHIHHRNLPQFEEVPSCSSNHLEENPSEKFQNLEAQEAIPLHMVPSFESSLEYYTFSQVLPTESHQVDYGLLLPVCHGLIDPEPFDAVFFDVFEQHKVPEYVCSSSSSKKGESRLPCLALGGIAQSSTPASGLFEDFPSEIFDYFEDIPASLEK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0736 308 Gene3D - 29 82 - -
Prci7g0736 308 SMART sant 29 79 IPR001005 -
Prci7g0736 308 SMART sant 83 131 IPR001005 -
Prci7g0736 308 ProSiteProfiles Myb-like domain profile. 86 129 IPR001005 -
Prci7g0736 308 FunFam MYB transcription factor 30 82 - -
Prci7g0736 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 81 IPR017930 -
Prci7g0736 308 CDD SANT 32 77 IPR001005 -
Prci7g0736 308 FunFam Transcription factor GAMYB 85 157 - -
Prci7g0736 308 Pfam Myb-like DNA-binding domain 30 75 IPR001005 -
Prci7g0736 308 Pfam Myb-like DNA-binding domain 86 126 IPR001005 -
Prci7g0736 308 ProSiteProfiles Myb-like domain profile. 25 77 IPR001005 -
Prci7g0736 308 PANTHER TRANSCRIPTION FACTOR DUO1 24 305 - -
Prci7g0736 308 SUPERFAMILY Homeodomain-like 28 125 IPR009057 -
Prci7g0736 308 CDD SANT 86 125 IPR001005 -
Prci7g0736 308 MobiDBLite consensus disorder prediction 1 28 - -
Prci7g0736 308 Gene3D - 85 161 - -
Prci7g0736 308 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 82 133 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0736 Prci-Chr7 25040863 25043383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0736 28 137 MYB Transcription Factor Family AT3G60460 83.636 1.38e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g0736 Myb_DNA-binding 1.4e-11 CL0123