Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0731 ATGGGGATAGATCTTGAGCAGCCATCTGGAGAATGTCATGAGGAAGACAATAGGAATCTAGTACTTGCTGATGCAGTTGATGGTATAAATAATATCAATGAACCCAGAAGCTCTTTAGAAGTTGTTGGAAATGATAACGAGAATGCAGGGCCAGGTACCAATGCTGAATTATTAAATCATGGAAAGGAAGGGTGCACTGGACAAGGAACCAACTTGAATTCTTCAAAAATACCAGAGCCTCATGATGGAATGGAATTCAATTCAAAGGAGGAAGCATTTTCATATTATAAAGATTATGCAAAATCTGTGGGATTTACAGCTATAATAAAAGCTAGCCGCCGATCTAGAATATCTGGAAAATTTATTGATGCAAAATTTGCATGTAGCAGATATGGAAACAAGCAAGAACCCTGTGCAGCTGAAACTTCGAATTCTCTTTCAAAAACAGATACCATACCAAGTATTCCTGTAAAAAGGAAAAGAGGTAGAGTGAACTTATCTTGGGCAAAAACAGATTGCAAGGCCTGTGTGCATGTCAAAAGAAGGCAAGATGATATATGGATAATCTGCAGTTTCATAAAAGAGCATAACCATGAAATTTTTCCTGACCAAGCCTTTTACTTTGCGGGACATGGGAATCTAGCTCTGAGTAGCAATGGCGATGCATTACAGGTTACTAGGGCTAGAACAAAAAATTTGTGTGTTATGCCGAGAAAATCTGATGGATATAAAAAAGTTGACAATAAGAAAGGTAGCAGTGGAAACCATTCAGGTAATAGACAGCAGTTGGCTTTAGATGAAGCAGATGTCCATGCTCTGCTTGACCATTTTATGTGTATGCAAGATGAGAATCCTAATTTCTTTTATGCAGTAGATCTGAGTGAAGAGCTGCAATTGAGAAGTGTTTTCTGGGTTGATGCAAAAAGTAGGCTTGATTATAGACACTTTGGTGATGTGATTCTTCTTGACACCACGCATATCAAGAATGAATATAAGCTTCCTGTTATTCCCTTTATTGGTGTGAACCACCACTATCAGTTCCTGTTGCTAGGATGTGCAATTGTGTCGGATGAGTCTAAATCAACTTATACATGGGTGCTGCAGGCATGGTTGAGGGCGATGGATGGATGTTCCCCAAAGGTAATACTTACAGACCAAGCCAAAGCTCTAAAAGAAGCTGTTACTGAAGTTCTTCCAGGAGTTCATCATTGTTTTTGTTTGTGGCATATCCTGAGCAAGATTCCAGAAAAGTTAAGTCATGTAACGCGGCAGCATGCAAATTTTATGACGAAATTTAACAAATGCGTGTTGAAGTCTTGGACAAATGAACAATTTGAGAAGCGATGGTGGAAAATGATTAGGAGATTCAATTTAAGTGATGAGAATTGGTTGTGCTCAATTTATGAGGATCGTCAATACTGGATACCTACTTATATGGGAGACACTTTCTTAGCTGGAATGTCTACAAGGAAACGTTCAGAAGCTATAAACTGTTTGTTAGACAAACATGTGCAGAGGAAAACTAAATTGAAAGAGTTTTTAGAGCAATACCAAGTGATATTACGAGGGAAATGTGAAGATGAAGCTAAAGCAGATTTAGAAACTTTTCATAAACAACCAGTATTAAAATCCCCCTCACCTTTTGAGAAACAAATGGTGACATTGTACACACGAACAATATTTAAGAAATTCCAAAGTGAGGTATTGGGAGTTATTGCTTGCCATCCAAAAAAAGAAAGTGAAAATGGACCGATAAAGATGTTTAGGGTTCAAGATTTTGAAGATAATCAACAATTTATCGTCTTGAGGAACAATATAACTTCTGATACATCTTGTTCATGCCGTTTATTTGAATTCAATGGTTTTCTTTGTAGGCATGTAATGATTGTTCTACAAATTTCTGGTGTACATAATATCCCATCTCAGTATATACTAAAACGGTGGACAAAAGAAGCAAAGAATAGACAAATAACAAGAGAGTTGTCTGATGTGGGAGACTCTAGGAGGAAACGCTATACTAATCTATGTCAGCTTGCGTTTGAGCTGGGAGATGAAGGGTCTTTATCACAAGCAAGTTACACTGTTGCTGTAAATGCACTGGAAGAAGCATTGAGAAAATGTGAGAGCATGATCAACTCAACTAAGAGTATCATAGAACCAAGCCTACCAATTCTTCGTTCTAATCATGTGACTATAAGCAACTCTGCTTGTAATATGAATGAAAAGGACAATTCTTTGAAGAAAAGACAGGAACTTCTGGAGCCAAAAATCATTGCTATTGGAATTGATAGCAGCTGGCAGCAAATGGCCAACTCTACAAGAGCAGCAGGCCTTGATTGTTCTTATGAATCACAACAAAGCATTCAAGAAATGGATCAGCTGACCTCAAGATCTCACAACTTGGATGGCTATTATGCCACTCAACATACTGTTTCTGGAATGGGGCAATTGAACTCAGTAGCTGCCAATCGTACTGATTATTACAGCAACCATAACATCCAAGGCCTAGGACAACTGAACTCAATCACACATATCCATGATGGCCGCTACCTAACTCCACAAGGGATGGCAGAGTTACCTTTCAGACAACAAACTAACCCGAATTGTTTTGATGTTCAAGATGGCTTGCGAAATGTGGAACAGTCCTCTGAAGGATCATCACATGTACTTGAGATTGGAGCCAAACAACTCAACTCAAGGCACCTTTTGCAGTAG 2715 0.3849 MGIDLEQPSGECHEEDNRNLVLADAVDGINNINEPRSSLEVVGNDNENAGPGTNAELLNHGKEGCTGQGTNLNSSKIPEPHDGMEFNSKEEAFSYYKDYAKSVGFTAIIKASRRSRISGKFIDAKFACSRYGNKQEPCAAETSNSLSKTDTIPSIPVKRKRGRVNLSWAKTDCKACVHVKRRQDDIWIICSFIKEHNHEIFPDQAFYFAGHGNLALSSNGDALQVTRARTKNLCVMPRKSDGYKKVDNKKGSSGNHSGNRQQLALDEADVHALLDHFMCMQDENPNFFYAVDLSEELQLRSVFWVDAKSRLDYRHFGDVILLDTTHIKNEYKLPVIPFIGVNHHYQFLLLGCAIVSDESKSTYTWVLQAWLRAMDGCSPKVILTDQAKALKEAVTEVLPGVHHCFCLWHILSKIPEKLSHVTRQHANFMTKFNKCVLKSWTNEQFEKRWWKMIRRFNLSDENWLCSIYEDRQYWIPTYMGDTFLAGMSTRKRSEAINCLLDKHVQRKTKLKEFLEQYQVILRGKCEDEAKADLETFHKQPVLKSPSPFEKQMVTLYTRTIFKKFQSEVLGVIACHPKKESENGPIKMFRVQDFEDNQQFIVLRNNITSDTSCSCRLFEFNGFLCRHVMIVLQISGVHNIPSQYILKRWTKEAKNRQITRELSDVGDSRRKRYTNLCQLAFELGDEGSLSQASYTVAVNALEEALRKCESMINSTKSIIEPSLPILRSNHVTISNSACNMNEKDNSLKKRQELLEPKIIAIGIDSSWQQMANSTRAAGLDCSYESQQSIQEMDQLTSRSHNLDGYYATQHTVSGMGQLNSVAANRTDYYSNHNIQGLGQLNSITHIHDGRYLTPQGMAELPFRQQTNPNCFDVQDGLRNVEQSSEGSSHVLEIGAKQLNSRHLLQ 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0731 904 ProSiteProfiles Zinc finger SWIM-type profile. 597 635 IPR007527 GO:0008270
Prci7g0731 904 SMART 26again6 610 637 IPR006564 GO:0008270
Prci7g0731 904 Pfam SWIM zinc finger 608 631 IPR007527 GO:0008270
Prci7g0731 904 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 709 IPR031052 GO:0006355
Prci7g0731 904 Pfam FAR1 DNA-binding domain 94 202 IPR004330 -
Prci7g0731 904 Pfam MULE transposase domain 319 412 IPR018289 -
Prci7g0731 904 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0731 Prci-Chr7 25019811 25025487 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci7g0731 FAR1 2.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0731 - - pcin:129315780 1803.88