Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0654 ATGGAGAGTTTCATCGGTGGGTCGTCGTCATCAAGAGCGATTCATGTATATCTAAGTTTCAAAGGAGATGATGAAACCTGCAGATTCACAGATATGCTTTGGGCTTCTCTTGAAAGTAATGATTTGAATGCCTTTTGGGATGACAAGAAGCTTGACCCATGTGATTCCATCTTTCTTCCACGTTCCTTTCTCAAAGCTATTCAGCAATCCAACATTTCCATTGTTGTCTTCTCCAAAACTATGCTTCTTCTATATGATCCATCTGAGGTACAAAACCAGAGTAATTCTTTTGAAACAACTTTCGATGAACATGAAAAAAGGCCAGGGCAACAAGTTATTGATGACATCATTATAGCGGTCAAGAGAAAAATGCGTGAATTGGTCTGCACCAATATCGATGAAGATCTAGTAGGTATGCAGTCTCGAGTGAAAGAAGTAGAAGAGCTTCTTGACTTGGGTAATTCAAGTGATGAAATTCAAGTTGTGGGCATTTGTGGTATGGGTGGGGTAGGCAAGACAATCCTTGCAAGAATTCTATATGATAGGGTCTCTCACCATTTTGATGCGTCTTATTTTGTACTTAATGGATTTGAATTTTATATGACCACAGGGCTAAAACATCATAAGAGAACTCTCATAGTTCTCGATTGTTCTGACACTTTTAAGATTCTAGGACAACTGCTCTATACTATAAAATATAAGCAATTGGGTGGAGGGAGTAGAATCATCATAACCACCAGAGATGAAGAAATGTTTAGAAAGTTTGAGAAGTGTGATATTTACAGGGTTAAACCATTGACCAGAGACGAAGCTCTTCAATTATTTTGTAGAAAAGCTTTCAAATGTGAATGTTCGGTGAGAGGTTATGAGGAGCAAATAGATAGTGTACTCAAGTATGCTAATGGCCTTCCATTAGCAATTGTTGAATTGGGCTCATTTTTATATAATAGAAGACCCTCAGAATGGAGCAATGCCATGGTTGAATTCAAAAGGGTCTCTAACTCTGATGTAATGAAGGTGCTCCAAAAACGTTTTGATGAACTGGGCTTCAATTGCATGTAA 1062 0.3804 MESFIGGSSSSRAIHVYLSFKGDDETCRFTDMLWASLESNDLNAFWDDKKLDPCDSIFLPRSFLKAIQQSNISIVVFSKTMLLLYDPSEVQNQSNSFETTFDEHEKRPGQQVIDDIIIAVKRKMRELVCTNIDEDLVGMQSRVKEVEELLDLGNSSDEIQVVGICGMGGVGKTILARILYDRVSHHFDASYFVLNGFEFYMTTGLKHHKRTLIVLDCSDTFKILGQLLYTIKYKQLGGGSRIIITTRDEEMFRKFEKCDIYRVKPLTRDEALQLFCRKAFKCECSVRGYEEQIDSVLKYANGLPLAIVELGSFLYNRRPSEWSNAMVEFKRVSNSDVMKVLQKRFDELGFNCM 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0654 353 Gene3D - 119 202 IPR027417 -
Prci7g0654 353 PRINTS Disease resistance protein signature 161 176 - -
Prci7g0654 353 PRINTS Disease resistance protein signature 300 314 - -
Prci7g0654 353 Pfam TIR domain 15 82 IPR000157 GO:0007165
Prci7g0654 353 Gene3D - 7 84 IPR035897 -
Prci7g0654 353 Pfam NB-ARC domain 208 337 IPR002182 GO:0043531
Prci7g0654 353 Pfam NB-ARC domain 146 193 IPR002182 GO:0043531
Prci7g0654 353 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 350 IPR027417 -
Prci7g0654 353 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 102 IPR035897 -
Prci7g0654 353 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 348 IPR044974 GO:0006952
Prci7g0654 353 Gene3D - 265 349 IPR042197 -
Prci7g0654 353 ProSiteProfiles TIR domain profile. 12 150 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0654 Prci-Chr7 23880644 23882039 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0654 137 349 WRKY Transcription Factor Family AT5G45050 28.099 3.48e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0654 - - pcin:129316609 711.064