Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0645 ATGAATCGCCTTAGCTTACCAAGCAGCTCATCATCATCGTCATCTCGGAGGACCTGGAAATACGAAGTGTTTCTAAGTTTCAGAGGTGAGGATACTCGCAACAGTTTCACTGGTCATCTCCATGCTGCTCTTCAACGAAAAGGTATATATACCTTCAAGGATGATAAAAAGCTCCAGCGAGGAAAACGTATTCGACCCGAACTCCTCAAAGCTATTGAGCAGTCCAGGATTTCAATCGTCGTCTTCTCCAAAAATTATGCTGATTCATCATGGTGCTTGGACGAACTGGCAAAGATCTGTGAGGGAATCGCAGAACCGGGATACACTGTTCTTCCAATTTTCTACGATGTCGATCCATCTGAGGTACGGAATCAGAGGGGGGATTTCGAAGAAGCCTTTAATAAACATAAGCAAAGCTCAAGTGACAGAGTACAGAGATGGAAGACAGCTTTGAGACAAGCAGCCGATCTCTCTGGTTATGATGTGAGGAATAAATCAGAGTCTGACGTTATTGATCAAATCGTTCTGGAAGTAACCCATACACTAAAACATAGATTCTCAAGTCTGGCAGAGGATCTAATTGGGATGCAATCTCGTGCAGAAGCTTTTGAAAAGCTTCTAAATCTAGACTCATCAGATGATCATGCTCAATTTGTAGGGATTCTGGGAATGCCCGGAGTAGGAAAGACTACTCTTGCTGCTGTTGTATACGATAGAATTTCCCACCAATTTGATGCTTGTTGTCTTCTTCTTGATGTGAGTAAAGTTCACAAGGGTCCTGGTCTTGTCCGTCTACAAAAACAGCTCCTTTGCGAAGCAGTGGGGAAAGATCAAGAGGTTTGGGAGGATCACACAGGAACCAATTTAATAAGAACTAGGCTTTGTAACTGCAAAACTCTTATTGTTGTTGATAATGTTGATCATGATGAACAATTGCAGAAATTGGTTGGAAAGCCTGAGTGGTTTGGTCCTGGGAGTAGAATCATCATAACAACTAGAGATGAGAAAATCCTGGAGAGACATGGAGTGAAAGTGAATAAAGTTTACAAGGTTGAACTACTGAATGATGAAGAAGCTCTTCAACTTCTTTGTAGAAGAGCCTTTAAAAGTGATGATCCTGAAGATGAATTTGAAGAGTTGACTCATAATCTTCTACAATATTCTAAGGCCCTTCCATTGGCAATCAAAGTGCTAGGTTCCTCTTTGTTTAAGAGGCAACAATCAGAGTGGCGAGCACAGTTGGATAGATTGAAAGAAAATCCCAACCAAGAGGTTATGGGAGTGCTGGAAACAAGTTTATTTTTGCTTGAGCAAAGCGACAAGGATATATTTTTGGATGTTGCTTGTTTCTTCAAGGGAGAAGATGAGAACTATGCCAGAAAAATCCTACACCATTGTGGATTTAATCCTGAGCTTGGAATTAACATTCTGTGTGAAAGATCACTCATGGTCATTGTCAATGAAAGAATCTGGATGCATGATTTGCTTCAAGAACTGGGATGGAAGTTTGCAAAGGGAGAATTTCCTCAAGAGCCAGCAAAGTGGAGCAGACTCTGGTTGTACAAAGATCTTCAAGCTGTAAAGACAGGAACCGAAAAAGTTGAAGCCATCGTCTTGAAGGAGGAAGATATAGATCTGAATGAGATGCTGCCATTGAGGGCTGAAGCTTTATCACAAATGACTCGCCTCAGACTAATTATATTCCCTCATGTGAAATTTTCAGGAAAGCAGCTGAATAATCTCTCCAATGATTTACGATTTCTTTCATGGCATAAATTTCCTTTCAGCTATTTACCATCAAGTTTTGAGCCAGCTGAACTTGCTGAACTCATCATGCCTGATAGCAATGCAAGACTATTGTGGGAAGGCATAAAGACCATGCCAAAGTTGAAGATCATGGATCTACGTGGCTCTAAAAACCTAATCAAGACGCCAAATCTTAGAGGAGTGAAAAATCTTGAGAAGCTAGACCTTGAAGGATGTAGTGGATTATTAGAGGTTGACGCATCCACTGGAGATCTTCGGAAGCTGACGTCACTGAATTTGAGAAACTGTGATCGTCTAATCAGTATCCCGAACACCTTATTTCTTTCAACTTCTCTTGAAACTTTGAATCTTCCTGGCTGTTTCAAACTTGCTCAACGCTTGAATTTCCAAGGACCTCGATAG 2169 0.4108 MNRLSLPSSSSSSSSRRTWKYEVFLSFRGEDTRNSFTGHLHAALQRKGIYTFKDDKKLQRGKRIRPELLKAIEQSRISIVVFSKNYADSSWCLDELAKICEGIAEPGYTVLPIFYDVDPSEVRNQRGDFEEAFNKHKQSSSDRVQRWKTALRQAADLSGYDVRNKSESDVIDQIVLEVTHTLKHRFSSLAEDLIGMQSRAEAFEKLLNLDSSDDHAQFVGILGMPGVGKTTLAAVVYDRISHQFDACCLLLDVSKVHKGPGLVRLQKQLLCEAVGKDQEVWEDHTGTNLIRTRLCNCKTLIVVDNVDHDEQLQKLVGKPEWFGPGSRIIITTRDEKILERHGVKVNKVYKVELLNDEEALQLLCRRAFKSDDPEDEFEELTHNLLQYSKALPLAIKVLGSSLFKRQQSEWRAQLDRLKENPNQEVMGVLETSLFLLEQSDKDIFLDVACFFKGEDENYARKILHHCGFNPELGINILCERSLMVIVNERIWMHDLLQELGWKFAKGEFPQEPAKWSRLWLYKDLQAVKTGTEKVEAIVLKEEDIDLNEMLPLRAEALSQMTRLRLIIFPHVKFSGKQLNNLSNDLRFLSWHKFPFSYLPSSFEPAELAELIMPDSNARLLWEGIKTMPKLKIMDLRGSKNLIKTPNLRGVKNLEKLDLEGCSGLLEVDASTGDLRKLTSLNLRNCDRLISIPNTLFLSTSLETLNLPGCFKLAQRLNFQGPR 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0645 722 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 184 - -
Prci7g0645 722 Pfam TIR domain 20 188 IPR000157 GO:0007165
Prci7g0645 722 Pfam NB-ARC domain 209 423 IPR002182 GO:0043531
Prci7g0645 722 SMART till_3 20 157 IPR000157 GO:0007165
Prci7g0645 722 Gene3D - 353 436 IPR042197 -
Prci7g0645 722 Gene3D Ribonuclease Inhibitor 535 718 IPR032675 -
Prci7g0645 722 SUPERFAMILY "Winged helix" DNA-binding domain 424 524 IPR036390 -
Prci7g0645 722 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 160 IPR035897 -
Prci7g0645 722 Gene3D - 183 349 IPR027417 -
Prci7g0645 722 PRINTS Disease resistance protein signature 388 402 - -
Prci7g0645 722 PRINTS Disease resistance protein signature 293 307 - -
Prci7g0645 722 PRINTS Disease resistance protein signature 218 233 - -
Prci7g0645 722 PRINTS Disease resistance protein signature 648 664 - -
Prci7g0645 722 ProSiteProfiles TIR domain profile. 19 182 IPR000157 GO:0007165
Prci7g0645 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 446 IPR027417 -
Prci7g0645 722 Gene3D - 13 182 IPR035897 -
Prci7g0645 722 SUPERFAMILY L domain-like 538 711 - -
Prci7g0645 722 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 714 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0645 Prci-Chr7 23772640 23776352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0645 21 713 WRKY Transcription Factor Family AT4G12020 30.919 1.97e-83 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0645 - - pcin:129315185 1432.16