Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0638 ATGGAGGGTTTCAATAGTGGATCATCACCATCGAAGCCAAACCATGTTTATCTAAGTTTCAGAGGAGATGACAGAAGTTGCGACTTCACAGATAGGCTTTTGGCTGCTCTTGAAAGTGATGATTTAAATACCTTCTGGGATGACAAGAAGCTTGAACCAATTCATTCCATCTTTCTTCCACGTTCCTGTCTCAAAGCTATTCAGCAATCAAACATTTCCATTGTTGTCTTCTCCAAAAACTTTGCTGCTTCTACATGGTGCCTACAGGAACTCTCTGCGATTCTTGAACGTATCCATGAACCACGACATACAGTTGTTCCAATTTTTTATGATGTAGATCCATCTGATGTACAGAATCAGAGTAATTCTTTTGAAAAAGCTTTCGCTGAACATGAACGAAGATTCACACGAAGTGATGTACACAGCTGGAGGTTAGCAATGAAACGAGTTGCCCATTGCCCTGGTTGGTACACACCGCACAACCCATGGCAACAAACTATCGATGACATTGTGAGAGAAGTGAAGAAAAAAATGCGAGAATTAGTTCATGTTGATGTTGACATGGTGGGGATGCAATCACGAGCCAAAGAAGTAATAAAGCTTTTAGAATTGGGTGTGAATGATGGGGTTCGAGTTGTGGGCATTTGCGGCATGGTTGGGATTGGGAAGACAACTCTTGCCAGAGTTGTATATGATAGGATCTCTTTCAATTTTGATGCTTCTCATTTCATATACAAAGGAAATGAATTTTGTATGAGCAGTAGGCAACTACAGGGCGAGAATATTCTCCTAGTTCTTGATGATATTAGTAGTTACAATCTTGAACCAGTAATTCAGACTATAGATGATAACTGGTTAGGCAAAGGGAGCAGAATCATCATAACAGCTAGAGATGTAGGAGTCCTAAAGGGTTTTAAGATGCATGATATTTATAGAGTTAAACCATTGACTAAGGATGAAGCTCTTCAATTACTCTGTAGAAAAGCTTTCAGACGTAATTTTCCTATAAGAGGCTATGAAGAGCAAATAAATAGCGTACTTGAATATGCTAATGGCCTTCCATTAGCAATTGTAGAATTTGGCTCATTCTTACACAGTATAAGAGCTTCAGAATGGAGCATTAGTGCCTTCATTGAATTCAAAAAGGTTGTTAACTTTGTAGTAATGAAGGCCCTCAAAAAATGTTTTCTCGAGCTGAGCCCTAATGGTCGAAAGTTTTTTTTAGACATTTCATGTTTTTTCATAGGGAAGGATATTAAATATGCAGAAGGAATTTTAAGGTGTTATAGATATGACAAATCACTTATGACTGTTATAGATCAAAAAATACTAATGCATGGTCTAATGCAAGAAATGGGAAGAGAAATTGTGCGGCAACAATCCCCTTCTAGGCCTGAAGAGTGGAATAGATTGTGGGATTTTAATGATATTGATCGTGTCATGCAAAATGACAAGGTTACTCCCAAAGTTAAAGCTATAGTCTTGGATCTAGAAGATTCACAAGGGAGGACATTAAAGGCTGAAGCTTGA 1530 0.3824 MEGFNSGSSPSKPNHVYLSFRGDDRSCDFTDRLLAALESDDLNTFWDDKKLEPIHSIFLPRSCLKAIQQSNISIVVFSKNFAASTWCLQELSAILERIHEPRHTVVPIFYDVDPSDVQNQSNSFEKAFAEHERRFTRSDVHSWRLAMKRVAHCPGWYTPHNPWQQTIDDIVREVKKKMRELVHVDVDMVGMQSRAKEVIKLLELGVNDGVRVVGICGMVGIGKTTLARVVYDRISFNFDASHFIYKGNEFCMSSRQLQGENILLVLDDISSYNLEPVIQTIDDNWLGKGSRIIITARDVGVLKGFKMHDIYRVKPLTKDEALQLLCRKAFRRNFPIRGYEEQINSVLEYANGLPLAIVEFGSFLHSIRASEWSISAFIEFKKVVNFVVMKALKKCFLELSPNGRKFFLDISCFFIGKDIKYAEGILRCYRYDKSLMTVIDQKILMHGLMQEMGREIVRQQSPSRPEEWNRLWDFNDIDRVMQNDKVTPKVKAIVLDLEDSQGRTLKAEA 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0638 509 Gene3D - 255 310 IPR027417 -
Prci7g0638 509 Gene3D - 176 254 IPR027417 -
Prci7g0638 509 Gene3D - 315 396 IPR042197 -
Prci7g0638 509 Gene3D - 12 175 IPR035897 -
Prci7g0638 509 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 410 IPR027417 -
Prci7g0638 509 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Prci7g0638 509 Pfam NB-ARC domain 255 366 IPR002182 GO:0043531
Prci7g0638 509 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 496 IPR044974 GO:0006952
Prci7g0638 509 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 156 IPR035897 -
Prci7g0638 509 PRINTS Disease resistance protein signature 212 227 - -
Prci7g0638 509 PRINTS Disease resistance protein signature 350 364 - -
Prci7g0638 509 Pfam TIR domain 15 177 IPR000157 GO:0007165
Prci7g0638 509 SMART till_3 13 153 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0638 Prci-Chr7 23702291 23704147 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0638 66 497 WRKY Transcription Factor Family AT4G12020 29.140 5.78e-44 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0638 - - pcin:129316603 1031.17