Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0632 ATGAACATGGAACCAAGTTTGATTTCGAGACGAAGAAATTGGAGCGAAGTGGTAGCTTCGATCTTTGTTATTATTACTGTTCTTGAGTTCTTCCCCCAAATTGACGCAGTTTGTTCTCCATCGTGCGGCAAAATCACCAACATATCGTATCCTTTTCGTCTTAAAGGTGACCCCAAACATTGCGGCGACAAGAATTTTGAGTTACAGTGTATCTCCGGCAACGGCAGAGACGATGTCCTCGGGTTACGCATTCTCTCCGGCGAATTCTACGTGCTGTCGATCAACTACACAGTCTCCAGCATCCGACTGGTTGATCCAAACTTCTATGATGATCATCGCTCCAACAATTGCTCCTCCCTCCCTCGCTACTTCCTTTACGGCGGGAATTTCAGTGGATCCGACTTCAGTCTCCGTCTCCGAGATTTTAATTATGAAGTAATGTATATGAAGTGTGACAGAGCATTGAGGGACAATCCTTATTATGTCGACACCGATCCGTGCTTCTTGGGTTCGCATATTTACGCAGTTCCGGGAAACATATCGTTGGCGGACTTGAAGATCGGCTGCCACGTCATCGCCGTTACGCCGTCGTCGATTCCTGATGATGAGTTCCTTAAGTTGCGATACGTTGACATCCACCGGAACTTGCAGGTCTTTGGATTTGAGATAAGCTGGGATTCGGTTATTAATAGGTGTCCCCATACTCCATTGAACGCCGACCAATGCGAAATGGCGATATATTGTCTCGGACAAGCACTAGCGACTTTGTGTAGCATATTGAACGGAATCTATTTTGTAATAACACTTCGTTCCCCAGCAATATTTCGTTCAAGAACATCGCGTCTCAATCCTCCATTAAAGGACGCACCAGAATACTACATAGATGAGACAATGTTATATACATGGTATGTGGTAGTATTCTTGCTGGCAGTTAGAGCTCTCTTTGGAGTAACACTTTTAACTGCGCTGTTAATTTTCAAGAGGAGAAAGAGACACTTATCGATGTATGAAGATGTTGAACATTTTCTGCAACATAGTGATCTCATGCCCATCAGATACTCTTACAAGGAAATTAAGAATATGACCAAAGGCTTTAAAGACAAGTTGGGAGAAGGAGGTTTCGGTACTGTATACAAAGGCAAGCTGCGTAGTGGTCCTCTTGTAGCTGTTAAGTTGTTGGGTAAATTCAAAGCCAATGGCCAAGAATTTATTAGCGAAGTAGCTACCATCGGGAGGATACATCATGTTAATGTTGTTCGTCTTATTGGATTTTGTGTAGAGGGTTCAAAACGTGCTCTTGTCTATGAGTTTATGGTTAATGGTTCTCTTGATAAGCTTATTTTCCCTAAAGAAGGAAGTGCTTTTCTAAGTTATGAAAAAATACATCAGATATCTCTTGAAGTGGCTCGTGGGATTTCCTATCTTCATCATGGTTGTGATATGCAAATCTTACATTTTGATATTAAGCCACATAACATTCTCCTTGATGACAACTACATCCCAAAGGTTTCAGATTTCGGACTTGCAAAACTATATCCTAGAGATGATAGCAGTGTTGCTTTGACCGCTGTTAAAGGAACGTTAGGATATATGGCTCCTGAATTGTTTTACAAAAATATTGGAGGAGTGTCCTACAAAGCTGATGTTTATAGCTTTGGAATGCTTTTGATGGAAATGGCAAGTAGAAGAAGGAACACAAAATCACGTACTACCAAGCATTCAAGTGAAAATTACTTTCCATTATGGCTATATGATCATTTTACTCAAGAGAAAGACATAGGAATAATGGAAGACTTGACAAGAGAAGATAAGGACATAATAACAAAGATGTTCATTGTTGCATGGTGGTGTATTCAATTTAAACCAGTTGATCGTCCTTCAATGACCAAAGTTGTGGAGATGCTAGAAGCAAATGTTGAAAGCCTTGAAATACCTCCGAAACCAGTGTGGTATGCTCAGGAAAATATTGTAGCCAGCCATGGATCTAATTCTGATCAAGCATCATGTAGTGATTGCATAAGTTCTAGTTATGCAAGCGATGATTTTTAG 2049 0.4085 MNMEPSLISRRRNWSEVVASIFVIITVLEFFPQIDAVCSPSCGKITNISYPFRLKGDPKHCGDKNFELQCISGNGRDDVLGLRILSGEFYVLSINYTVSSIRLVDPNFYDDHRSNNCSSLPRYFLYGGNFSGSDFSLRLRDFNYEVMYMKCDRALRDNPYYVDTDPCFLGSHIYAVPGNISLADLKIGCHVIAVTPSSIPDDEFLKLRYVDIHRNLQVFGFEISWDSVINRCPHTPLNADQCEMAIYCLGQALATLCSILNGIYFVITLRSPAIFRSRTSRLNPPLKDAPEYYIDETMLYTWYVVVFLLAVRALFGVTLLTALLIFKRRKRHLSMYEDVEHFLQHSDLMPIRYSYKEIKNMTKGFKDKLGEGGFGTVYKGKLRSGPLVAVKLLGKFKANGQEFISEVATIGRIHHVNVVRLIGFCVEGSKRALVYEFMVNGSLDKLIFPKEGSAFLSYEKIHQISLEVARGISYLHHGCDMQILHFDIKPHNILLDDNYIPKVSDFGLAKLYPRDDSSVALTAVKGTLGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNTKSRTTKHSSENYFPLWLYDHFTQEKDIGIMEDLTREDKDIITKMFIVAWWCIQFKPVDRPSMTKVVEMLEANVESLEIPPKPVWYAQENIVASHGSNSDQASCSDCISSSYASDDF 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0632 682 Pfam Protein kinase domain 366 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0632 682 PANTHER RUST RESISTANCE KINASE LR10-RELATED 336 658 IPR045874 GO:0004672
Prci7g0632 682 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Prci7g0632 682 ProSitePatterns Protein kinases ATP-binding region signature. 369 391 IPR017441 GO:0005524
Prci7g0632 682 ProSiteProfiles Protein kinase domain profile. 363 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0632 682 SMART serkin_6 363 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0632 682 FunFam serine/threonine-protein kinase PBS1-like 332 437 - -
Prci7g0632 682 Gene3D Phosphorylase Kinase; domain 1 337 437 - -
Prci7g0632 682 FunFam PR5-like receptor kinase 438 647 - -
Prci7g0632 682 SUPERFAMILY Protein kinase-like (PK-like) 348 636 IPR011009 -
Prci7g0632 682 Gene3D Transferase(Phosphotransferase) domain 1 438 645 - -
Prci7g0632 682 Pfam Wall-associated receptor kinase galacturonan-binding 38 105 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0632 Prci-Chr7 23611161 23616068 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0632 17 654 Receptor kinase-like Gene Family AT5G38260 34.985 1.60e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Prci7g0632 Pkinase 6.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0632 - - pcin:129315502 1365.9