Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0628 ATGAGAACTTGGAAATACGAAGTGTTCATAAGTTTCAGAGGTGACGATACAAGAAAAGGTTTCACTGCTAATCTTTTTTCAGCTCTTGAACGAAAAGGCATTTTTGCCTTTAGAGATGATCGACAGCTTCAGAAAGGAGATTCCATTTCAGGAGAGCTTGTCAAAGCAATAAAGCAATCCAGGATTCATATCGTTGTCTTTTCCAAGCGTTTCGCTGATTCTACGTGGTGCGTGGAAGAATTGGCAAATATCTCTGAACTCATCTTCTTCGAATCTGGATACACTGTTATACCAGTTTTTTATGATGTAGATCCATCTGAGGTACAACATCAAAGTGGGAATTTTAAAGAAGCCTTTGATATACATGAGCAGAACTTTAGTGATAATATAGACAAGGTACAAAGATGGAGGCTAGCTTTGACTCAAGTAGCGACTCTCCCTGGCTGGGATGTACGGAATAAATCAGAAAAGGAAATCATTGACAACATTGTTAACAAAGCAATTAGCGAATTGGGGCATAGATTCTCAAGTTTGGCTGATGATCTTGTAGGGATGCAATCTCATGTAGAAGCTTTAGAAAACCTTTTAAATTTGGAATCATCAAATGATGTTCGATTCGTAGGAATCACTGGAATCCCTGGAATTGGGAAGACTACTCTTGCTGCAGTTGTGTATGACAGAATCTCCTACCAATTTGATGCTTCTTGTTTCCTTCACAATGTGAGTGAAGCATATATTGTCCATCTACAACAACAGCTTCTTTCTGAAATCCTAAAGACAAATGTACGTGTGAGAAACACTTACGAGGGAAGGAATATCATGAGTTGGAAGCTTTCAAACCTTAAAAGTCTTGTAGTTGTAGATAACATTAATAGTCTATCACAATTGGAGAATTTGGTTGGAAGGCTAGCATGGTTTGGTCAAGGGAGTAGAATCATCATAACAACTAGATATGAACATATTCTATATCATCATACACATCAAGTGTCCAAAGTTTATAGGGTTGAACTATTAAAGGATCATGAAGCTCTTCAGCTTCTTTGTTTAAAAGCTTTCAATTGTGATTATCCCTTGAACGATTTTCGAGAGTTGACCCATGGTGTATTGCAATATGCTAAAGCCCTTCCATTAGCGATCAAAGTGTTTGGTTCCCATTTAATTGGGAAACAAGAATCAGAATGGAGAACTGAGCTAGAGAGATTGAAAGAAATTCCTAACAGAGATGTCATGAAATTTCTTCAAAGAAGTTATGATGAGCTAGATGAATTGAAGAAAGAAATATTTCTTGATATTGCTTGCTTCTTTAATGGAGCAAACGTGAACTATGTTGCAAATATTCTACAATATCATGGGTTTGTACTTGAATATGGAATTAGACTTCTCCATGATAGGTCACTCATAAGCATTGTCAATGGCACACTTTGGATGCATGATTTGTTGCAAGAACTTGGAAGGAAAATTGTTCATGAACAATCTATCAAGCATTCGAAAAAGAGAAGTAGGTTATGGTCCTACCTGGATCTTCGAGACATAAACAGAGGAATGGAAAATGTTGAAGCAATCGTTTTGAACCAAGAAGTTGGATCAGAGAGTCCATTAAAGGCTGAAGTTTTATCACAGATGAGCTACCTGAAATTGCTTATACTGCCTCCCATGAAGTTTTCAGGAAACTTGAATGATCTTTCCAACCAATTACGATATCTTTCATGGCCAAGATATCCATTCAACTATTTACCTTCAAGATTTAATCCAAAATATCTTATTGAGTTGATCATGTCAGACAGTGAAATAAGATATTTGTGGGAAGGGAAAAAGAGCTTGCCATGTTTGAGAAGCATAGATCTTCATGGTTCTAAAAGTCTGGTTGAGACTCCAGATCTTAGTGGGGCAGTAAATCTTAAGAAACTAAATCTTGAAGGATGTATTGGATTATTGCAGGTTCATGCATCAATTGGAGATCTTAACAAGCTATTATTCTTGAATATGAGAAACTGTAGTAATTTAATTTGTATTCCAAGTAGCTTGTTTTTGTTAAGATCTCTTGAAACCTTCAATCTCTGCCATTGTTCAAGACTCCGGGAAATTTTTCAAGTGAAGGATCTCTAG 2106 0.3656 MRTWKYEVFISFRGDDTRKGFTANLFSALERKGIFAFRDDRQLQKGDSISGELVKAIKQSRIHIVVFSKRFADSTWCVEELANISELIFFESGYTVIPVFYDVDPSEVQHQSGNFKEAFDIHEQNFSDNIDKVQRWRLALTQVATLPGWDVRNKSEKEIIDNIVNKAISELGHRFSSLADDLVGMQSHVEALENLLNLESSNDVRFVGITGIPGIGKTTLAAVVYDRISYQFDASCFLHNVSEAYIVHLQQQLLSEILKTNVRVRNTYEGRNIMSWKLSNLKSLVVVDNINSLSQLENLVGRLAWFGQGSRIIITTRYEHILYHHTHQVSKVYRVELLKDHEALQLLCLKAFNCDYPLNDFRELTHGVLQYAKALPLAIKVFGSHLIGKQESEWRTELERLKEIPNRDVMKFLQRSYDELDELKKEIFLDIACFFNGANVNYVANILQYHGFVLEYGIRLLHDRSLISIVNGTLWMHDLLQELGRKIVHEQSIKHSKKRSRLWSYLDLRDINRGMENVEAIVLNQEVGSESPLKAEVLSQMSYLKLLILPPMKFSGNLNDLSNQLRYLSWPRYPFNYLPSRFNPKYLIELIMSDSEIRYLWEGKKSLPCLRSIDLHGSKSLVETPDLSGAVNLKKLNLEGCIGLLQVHASIGDLNKLLFLNMRNCSNLICIPSSLFLLRSLETFNLCHCSRLREIFQVKDL 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0628 701 Gene3D - 1 172 IPR035897 -
Prci7g0628 701 Gene3D - 173 333 IPR027417 -
Prci7g0628 701 Gene3D - 337 421 IPR042197 -
Prci7g0628 701 ProSiteProfiles TIR domain profile. 4 171 IPR000157 GO:0007165
Prci7g0628 701 FunFam Disease resistance protein (TIR-NBS-LRR class) 2 172 - -
Prci7g0628 701 PRINTS Disease resistance protein signature 206 221 - -
Prci7g0628 701 PRINTS Disease resistance protein signature 372 386 - -
Prci7g0628 701 PRINTS Disease resistance protein signature 652 668 - -
Prci7g0628 701 PRINTS Disease resistance protein signature 277 291 - -
Prci7g0628 701 SUPERFAMILY L domain-like 533 693 - -
Prci7g0628 701 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 431 IPR027417 -
Prci7g0628 701 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 6 695 IPR044974 GO:0006952
Prci7g0628 701 Gene3D Ribonuclease Inhibitor 490 699 IPR032675 -
Prci7g0628 701 Pfam TIR domain 5 177 IPR000157 GO:0007165
Prci7g0628 701 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 149 IPR035897 -
Prci7g0628 701 SMART till_3 5 146 IPR000157 GO:0007165
Prci7g0628 701 SUPERFAMILY "Winged helix" DNA-binding domain 408 507 IPR036390 -
Prci7g0628 701 Pfam NB-ARC domain 186 422 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0628 Prci-Chr7 23570954 23576743 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0628 183 686 WRKY Transcription Factor Family AT5G45050 33.771 4.59e-79 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0628 - - pcin:129316221 893.649