Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0627 ATGAATTCCACAAACATCAAAGGGAGCTCATCATCATCATCATCATCATCATCATCATCATCATCATCATCTCGAAGGTTTAAGTATGAAGTGTTTCTGAGTTTTAGAGGTGAAGATACTCGCAGTGGTTTCACTGCTCATCTTTTTTCTGCTCTTCAACGAAGAGGTATATTTCCCTTCAAGGATGACGAAAGGATCCAGAAAGGAGATTCCATTTCAGGAGAACTCATTAAAGCAATTGAGCAGTCCCGAATTTCTATGGTGGTCTTCTCCAAAAACTATGCTGATTCAACATGGTGCTTGGAAGAACTAGCAAAGATCTCTGAGGAAGTTTTAGAATCAGGGCAGATGGTTTTTCCAGTTTTCTATGATGTGGATCCATTAGAGGTACAAAATCAGAGTGGCAATTTCAAAGAAGCCTTTGATAAACATGAGCGAAACTACAGTGATAACATAGAGAAGGTACAAAGATGGAGGATAGCTTTGACTCAAGTTTCTAATCTCTCTGGTTGGGATGTATGGACTAAATCAGAGTCAGAAGTAATTGATAAAATTGCTGATGAAGCAATAAGCAAATTGGGGCATAGATTCTCAAGTTTTGCTGATGATCTTATTGGGATGCAATCCCGAGTGGAAGCTTTAGAAAAGCTTCTAAATTTAGAATCTGACAAAGTTCGAGTTGTAGGCATTTGGGGAATGCCTGGAATAGGGAAGACTACTCTAGCTGCAGTTTTGTACGACAAGATCTCTCATCAATTTGATGCTTCTAGTTTTCTCCTTGATGTAGGAGGAGTTGCAAAACGCTTCAGTATGTTTCACCTACACCGACAAGTCATTTCTCAAATAATGTCAGAAAAAAATCAGGAGGTACCAGATGGTTATGAGGGTATGAATATCCTGAGACAGTGGCTTTCCTGCCATAAAACTCTTATTGTTGTTGATAATGTTGAGCATGGACATCAATTGGAGTACTTGTCTAGAGATTTTGTGTCGTTTGCCAAAGGAAGTAGAATCATCGTAACATCTAGAGATGAGGATATACTAGAATCCTGTGAAGTGGATGAAATCTACAAGGTTGAACTTTTGAAGGATCATGAAGCTCTTCAACTTTTTTGTAGAAAAGCCTTCAACCGAGATGATCCCTTGAGTGATTTTCAAGAGTTGACCCATAGACTACTTCAATATGCCGGAGCCCTTCCATTAGCAATCAAAGTGCTAGGTTCCCAATTGTTGAGAAAACAAAAGTCAGAGTGGAGTGCTGAGTTAGAAAGATTGAAAGAAATTCCAAACAAAGATGTTATGCAAGTTCTTGAAACAAGTTATAATCAGCTACGGACACTAGAAAAAGAAATGTTTTTAGATATTGCTTGTTTCTTTAATGGATCAGATGTGAACCATGTTCACAATATCTTAGAAAATTGTGGTTGTGGATTATATGATGTGATGGGAAATATTACAATTCTTTGTAATCAATCACTTATAAATATTGTCAACGGAACACTCTGGATGCATGATTTGTTGCTAGAACTGGGACGAAAAATTGTTCGGGAAGAATCTCCTGAACATCCTGCAAAGAGAAGTAGGCTGTGGTCGTATGAAGATCTTCAAGTTCTAAATAAAGGAACAAAAAAAGTAAAAGCAATCGTTTTGCACCCAGAAGTTCCTCAAGAGGTCACATTAAAGGCTGAAGTTTTATCACAAATGAGCTGCCTTAGACTCCTTATACTGCCTATTGTGAAGTCTTCAGGGAACCTGGGTTATCTCTCCGATGAATTACAATTTCTTTCATGGAAGAAATATCCTTTTAGCTATTTACCATCAGGTTTTGAGCCAACATGGCTTGTTGAATTGGTCATGCCTAACAGCGACCTAACACAACTATGGGAAGGGAAAAAGGTTTTGCCCAGTTTGAGGAGCATAGGTCTACGTGGTTCTAAAAGTCTAGTAAGGACGCCAGACTTTAGCGGGGTAAGAAATCTTGTGGAACTAAATCTAGAAGGATGTATCGGATTATTGCAAGTTCATCCATCTATTGGGCATCTTAAGCGGCTTCTATCCTTGAATTTGAGAAATTGCACTCATTTAACCAGTATCCCTCATAAATTACTTCTTATGAGTTCTCTTGAGACTCTGAACCTCTCTCATTGTTCAAGTCCACAAAATATTTCAAGCACGAAGGATCTCAATAGGCCTGAACCCGCCTATCATTCAGAACCCCTGCATCTTCAACAAACTATGATGGCATCCACGTCAAAAGAGGCTTCTTCTATTGCTGAAACTAATTCCACTAATATCCGAGGCAGCTCATCTTCAATAAGGACCTGGAAATATGAAGTGTTTTTGAGTTTCAAAGGTGATTACACTGATCGCCACAGTTTCACTTCTCATCTCTTTTGTGCTCTTCAACGAAAAGGTATATTTCCCTTTAGGGATGACAAAAGGTTCCAGAAAGGAGATTCTCTTTCCCAAGAGCTCATTAAGGCAATTGAGCAGTCTCGGATTTTCATTGTCGTCTTTTCCAGAAACTATGTTAATTCAACGCAGTGCTTGGAAGAATTGGCAAAGATCTCAGAGAGAATTTTTGATCCAAGATACACTGTTGTACCGGTTTTCTATGATGTGGATCCATATGAGATACAAACTCAGAAAGGGAATTTGAAAGAAGCCTTTGAAAAACATGAGCAAAACTTAAGTGATAATATATCCCATCAGAACTTAATTGATAATCTAAAGAAGCTACAAAGATGGAGACTAGCTTTGACTCGCGTTGCAAATCAACCTGGTTGGGATGTACGGACTGAGTGGAGTTGCAGAAAGTTTTGGCATGTTCCACCTACATCGACAGGTCATTTCTCAAATAATGCCAGAGAATCAATACGTGCCAGACGGTTATGA 2895 0.3876 MNSTNIKGSSSSSSSSSSSSSSSSRRFKYEVFLSFRGEDTRSGFTAHLFSALQRRGIFPFKDDERIQKGDSISGELIKAIEQSRISMVVFSKNYADSTWCLEELAKISEEVLESGQMVFPVFYDVDPLEVQNQSGNFKEAFDKHERNYSDNIEKVQRWRIALTQVSNLSGWDVWTKSESEVIDKIADEAISKLGHRFSSFADDLIGMQSRVEALEKLLNLESDKVRVVGIWGMPGIGKTTLAAVLYDKISHQFDASSFLLDVGGVAKRFSMFHLHRQVISQIMSEKNQEVPDGYEGMNILRQWLSCHKTLIVVDNVEHGHQLEYLSRDFVSFAKGSRIIVTSRDEDILESCEVDEIYKVELLKDHEALQLFCRKAFNRDDPLSDFQELTHRLLQYAGALPLAIKVLGSQLLRKQKSEWSAELERLKEIPNKDVMQVLETSYNQLRTLEKEMFLDIACFFNGSDVNHVHNILENCGCGLYDVMGNITILCNQSLINIVNGTLWMHDLLLELGRKIVREESPEHPAKRSRLWSYEDLQVLNKGTKKVKAIVLHPEVPQEVTLKAEVLSQMSCLRLLILPIVKSSGNLGYLSDELQFLSWKKYPFSYLPSGFEPTWLVELVMPNSDLTQLWEGKKVLPSLRSIGLRGSKSLVRTPDFSGVRNLVELNLEGCIGLLQVHPSIGHLKRLLSLNLRNCTHLTSIPHKLLLMSSLETLNLSHCSSPQNISSTKDLNRPEPAYHSEPLHLQQTMMASTSKEASSIAETNSTNIRGSSSSIRTWKYEVFLSFKGDYTDRHSFTSHLFCALQRKGIFPFRDDKRFQKGDSLSQELIKAIEQSRIFIVVFSRNYVNSTQCLEELAKISERIFDPRYTVVPVFYDVDPYEIQTQKGNLKEAFEKHEQNLSDNISHQNLIDNLKKLQRWRLALTRVANQPGWDVRTEWSCRKFWHVPPTSTGHFSNNARESIRARRL 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0627 964 Gene3D - 198 359 IPR027417 -
Prci7g0627 964 ProSiteProfiles TIR domain profile. 775 959 IPR000157 GO:0007165
Prci7g0627 964 Gene3D Ribonuclease Inhibitor 550 734 IPR032675 -
Prci7g0627 964 Pfam NB-ARC domain 211 445 IPR002182 GO:0043531
Prci7g0627 964 Pfam Leucine Rich Repeat 614 632 IPR011713 -
Prci7g0627 964 Gene3D - 770 943 IPR035897 -
Prci7g0627 964 FunFam Disease resistance protein (TIR-NBS-LRR class) 363 445 - -
Prci7g0627 964 Pfam TIR domain 776 900 IPR000157 GO:0007165
Prci7g0627 964 Pfam TIR domain 28 197 IPR000157 GO:0007165
Prci7g0627 964 ProSiteProfiles TIR domain profile. 27 193 IPR000157 GO:0007165
Prci7g0627 964 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 455 IPR027417 -
Prci7g0627 964 FunFam Disease resistance protein (TIR-NBS-LRR class) 25 195 - -
Prci7g0627 964 Gene3D - 361 445 IPR042197 -
Prci7g0627 964 PRINTS Disease resistance protein signature 227 242 - -
Prci7g0627 964 PRINTS Disease resistance protein signature 396 410 - -
Prci7g0627 964 PRINTS Disease resistance protein signature 303 317 - -
Prci7g0627 964 PRINTS Disease resistance protein signature 703 719 - -
Prci7g0627 964 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 171 IPR035897 -
Prci7g0627 964 SUPERFAMILY L domain-like 550 718 - -
Prci7g0627 964 SMART till_3 28 168 IPR000157 GO:0007165
Prci7g0627 964 SMART till_3 776 926 IPR000157 GO:0007165
Prci7g0627 964 Gene3D - 26 197 IPR035897 -
Prci7g0627 964 MobiDBLite consensus disorder prediction 1 23 - -
Prci7g0627 964 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 734 IPR044974 GO:0006952
Prci7g0627 964 Coils Coil 408 428 - -
Prci7g0627 964 SUPERFAMILY "Winged helix" DNA-binding domain 432 535 IPR036390 -
Prci7g0627 964 SUPERFAMILY Toll/Interleukin receptor TIR domain 768 929 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0627 Prci-Chr7 23556163 23561913 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0627 205 713 WRKY Transcription Factor Family AT5G45050 33.769 5.80e-79 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0627 - - pcin:129315230 1835.85