Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0624 ATGAATTCCACAAACATCAAAGGGAGCTCATCATCATCATCATCATCATCATCATCATCATCATCATCATCTCGAAGGTTTAAGTATGAAGTGTTTCTGAGTTTTAGAGGTGAAGATACTCGCAGTGGTTTCACTGCTCATCTTTTTTCTGCTCTTCAACGAAGAGGTATATTTCCCTTCAAGGATGACGAAAGGATCCAGAAAGGAGATTCCATTTCAGGAGAACTCATTAAAGCAATTGAGCAGTCCCGAATTTCTATGGTGGTCTTCTCCAAAAACTATGCTGATTCAACATGGTGCTTGGAAGAACTAGCAAAGATCTCTGAGGAAGTTTTAGAATCAGGGCAGATGGTTTTTCCAGTTTTCTATGATGTGGATCCATTAGAGGTACAAAATCAGAGTGGCAATTTCAAAGAAGCCTTTGATAAACATGAGCGAAACTACAGTGATAACATAGAGAAGGTACAAAGATGGAGGATAGCTTTGACTCAAGTTTCTAATCTCTCTGGTTGGGATGTATGGACTAAATCAGAGTCAGAAGTAATTGATAAAATTGCTGATGAAGCAATAAGCAAATTGGGGCATAGATTCTCAAGTTTTGCTGATGATCTTATTGGGATGCAATCCCGAGTGGAAGCTTTAGAAAAGCTTCTAAATTTAGAATCTGACAAAGTTCGAGTTGTAGGCATTTGGGGAATGCCTGGAATAGGGAAGACTACTCTAGCTGCAGTTTTGTACGACAAGATCTCTCATCAATTTGATGCTTCTAGTTTTCTCCTTGATGTAGGAGGAGTTGCAAAACGCTTCAGTATGTTTCACCTACACCGACAAGTCATTTCTCAAATAATGTCAGAAAAAAATCAGGAGGTACCAGATGGTTATGAGGGTATGAATATCCTGAGACAGTGGCTTTCCTGCCATAAAACTCTTATTGTTGTTGATAATGTTGAGCATGGACATCAATTGGAGTACTTGTCTAGAGATTTTGTGTCGTTTGCCAAAGGAAGTAGAATCATCGTAACATCTAGAGATGAGGATATACTAGAATCCTGTGAAGTGGATGAAATCTACAAGGTTGAACTTTTGAAGGATCATGAAGCTCTTCAACTTTTTTGTAGAAAAGCCTTCAACCGAGATGATCCCTTGAGTGATTTTCAAGAGTTGACCCATAGACTACTTCAATATGCCGGAGCCCTTCCATTAGCAATCAAAGTGCTAGGTTCCCAATTGTTGAGAAAACAAAAGTCAGAGTGGAGTGCTGAGTTAGAAAGATTGAAAGAAATTCCAAACAAAGATGTTATGCAAGTTCTTGAAACAAGTTATAATCAGCTACGGACACTAGAAAAAGAAATGTTTTTAGATATTGCTTGTTTCTTTAATGGATCAGATGTGAACCATGTTCACAATATCTTAGAAAATTGTGGTTGTGGATTATATGATGTGATGGGAAATATTACAATTCTTTGTAATCAATCACTTATAAATATTGTCAACGGAACACTCTGGATGCATGATTTGTTGCTAGAACTGGGACGAAAAATTGTTCGGGAAGAATCTCCTGAACATCCTGCAAAGAGAAGTAGGCTGTGGTCGTATGAAGATCTTCAAGTTCTAAATAAAGGAACAAAAAAAGTAAAAGCAATCGTTTTGCACCCAGAAGTTCCTCAAGAGGTCACATTAAAGGCTGAAGTTTTATCACAAATGAGCTGCCTTAGACTCCTTATACTGCCTATTGTGAAGTCTTCAGGGAACCTGGGTTATCTCTCCGATGAATTACAATTTCTTTCATGGAAGAAATATCCTTTTAGCTATTTACCATCAGGTTTTGAGCCAACATGGCTTGTTGAATTGGTCATGCCTAACAGCGACCTAACACAACTATGGGAAGGGAAAAAGGTTTTGCCCAGTTTGAGGAGCATAGGTCTACGTGGTTCTAAAAGTCTAGTAAGGACGCCAGACTTTAGCGGGGTAAGAAATCTTGTGGAACTAAATCTAGAAGGATGTATCGGATTATTGCAAGTTCATCCATCTATTGGGCATCTTAAGCGGCTTCTATCCTTGAATTTGAGAAATTGCACTCATTTAACCAGTATCCCTCATAAATTACTTCTTATGAGTTCTCTTGAGACTCTGAACCTCTCTCATTGTTCAAGTCCACAAAATATTTCAAGCACGAAGGATCTCAATAGGCCTGAACCCGCCTATCATTCAGAACCCCTGCATCTTCAACAAACTATGATGGCATCCACGTCAAAAGAGGCTTCTTCTATTGCTGAAACTAATTCCACTAATATCCGAGGCAGCTCATCTTCAATAAGGACCTGGAAATATGAAGTGTTTTTGAGTTTCAAAGGTGATTACACTGATCGCCACAGTTTCACTTCTCATCTCTTTTGTGCTCTTCAACGAAAAGGTATATTTCCCTTTAGGGATGACAAAAGGTTCCAGAAAGGAGATTCTCTTTCCCAAGAGCTCATTAAGGCAATTGAGCAGTCTCGGATTTTCATTGTCGTCTTTTCCAGAAACTATGTTAATTCAACGCAGTGCTTGGAAGAATTGGCAAAGATCTCAGAGAGAATTTTTGATCCAAGATACACTGTTGTACCGGTTTTCTATGATGTGGATCCATATGAGATACAAACTCAGAAAGGGAATTTGAAAGAAGCCTTTGAAAAACATGAGCAAAACTTAAGTGATAATATATCCCATCAGAACTTAATTGATAATCTAAAGAAGCTACAAAGATGGAGACTAGCTTTGACTCGCGTTGCAAATCAACCTGGTTGGGATGTACGGACTGAATCAGAGTCAGAAGCCATTGATAAGATTGTTGATGAAATAGTGAGCAAATTGGGTTATAGATTTTCAAGTTTGGCTGATGATCTTGTCGGGATGCAATCTCATGTAGAAGCTTTAGAAAACCTTCTGAATTTAGACTCAGATGAAGTTCGAGTTGTAGAGATTTGGGGAATGCCCGGAATAGGGAAGACAAGTCTTGCTGCAGTTATGTATGACAAGATCTCTTACCAATTTGAAGCTTCTTGTTTCCTTCTTGATGTAGGTGGAGTTGCAGAAAGTTTTGGCATGTTCCACCTACATCGACAGGTCATTTCTCAAATAATGCCAGAGAATCAATACGTGCCAGACGGTTATGAGGGTATGAAGATCCTACGACAGTGGCTTTCCCGCCATAAAACCCTTATCGTTGTTGATAATGTTGAGCATGAACATCAAGTGGAGTACTTGTCTAGAGATTTTGTGCCGTTTGCCGAAGGAAGTAGAATAATCATTACATCTAGAGGTGAGCATAAACTAAAATCCCCTGAAGTGGATGAAAGCTACAAGGTTGAACTCTTGAAGGATCATGAAGCTCTTCAACTTTTTTGTAGAAAAGCCTTCAACCGAGATGATCCCTTGAGTGATTTTCAAGAGTTGACCTATAGTCTACTTCAAAATATCAAAGCCCTTCCATTAGAAATCAAAGTGTTAGGCTCCCATTTGCTTGGAAAACAAAGATCAGAGTGGATCAATGAGTTAGAAAGATTGAAAGTTATGGAAGTTCTTGAAACAAGTTATGATCAGCTTAATGCATTGGATAAGAAAATATTTCTAGATATTGCTTGTTTCTTTAATGGAGCAAATGTGAACCATGTTGAAAATATCCTAGACTCTTTATATCGGGAATATGATTTTTATGCCAAAAATACAGTTCTCTATGATCAGTGA 3726 0.3838 MNSTNIKGSSSSSSSSSSSSSSSSRRFKYEVFLSFRGEDTRSGFTAHLFSALQRRGIFPFKDDERIQKGDSISGELIKAIEQSRISMVVFSKNYADSTWCLEELAKISEEVLESGQMVFPVFYDVDPLEVQNQSGNFKEAFDKHERNYSDNIEKVQRWRIALTQVSNLSGWDVWTKSESEVIDKIADEAISKLGHRFSSFADDLIGMQSRVEALEKLLNLESDKVRVVGIWGMPGIGKTTLAAVLYDKISHQFDASSFLLDVGGVAKRFSMFHLHRQVISQIMSEKNQEVPDGYEGMNILRQWLSCHKTLIVVDNVEHGHQLEYLSRDFVSFAKGSRIIVTSRDEDILESCEVDEIYKVELLKDHEALQLFCRKAFNRDDPLSDFQELTHRLLQYAGALPLAIKVLGSQLLRKQKSEWSAELERLKEIPNKDVMQVLETSYNQLRTLEKEMFLDIACFFNGSDVNHVHNILENCGCGLYDVMGNITILCNQSLINIVNGTLWMHDLLLELGRKIVREESPEHPAKRSRLWSYEDLQVLNKGTKKVKAIVLHPEVPQEVTLKAEVLSQMSCLRLLILPIVKSSGNLGYLSDELQFLSWKKYPFSYLPSGFEPTWLVELVMPNSDLTQLWEGKKVLPSLRSIGLRGSKSLVRTPDFSGVRNLVELNLEGCIGLLQVHPSIGHLKRLLSLNLRNCTHLTSIPHKLLLMSSLETLNLSHCSSPQNISSTKDLNRPEPAYHSEPLHLQQTMMASTSKEASSIAETNSTNIRGSSSSIRTWKYEVFLSFKGDYTDRHSFTSHLFCALQRKGIFPFRDDKRFQKGDSLSQELIKAIEQSRIFIVVFSRNYVNSTQCLEELAKISERIFDPRYTVVPVFYDVDPYEIQTQKGNLKEAFEKHEQNLSDNISHQNLIDNLKKLQRWRLALTRVANQPGWDVRTESESEAIDKIVDEIVSKLGYRFSSLADDLVGMQSHVEALENLLNLDSDEVRVVEIWGMPGIGKTSLAAVMYDKISYQFEASCFLLDVGGVAESFGMFHLHRQVISQIMPENQYVPDGYEGMKILRQWLSRHKTLIVVDNVEHEHQVEYLSRDFVPFAEGSRIIITSRGEHKLKSPEVDESYKVELLKDHEALQLFCRKAFNRDDPLSDFQELTYSLLQNIKALPLEIKVLGSHLLGKQRSEWINELERLKVMEVLETSYDQLNALDKKIFLDIACFFNGANVNHVENILDSLYREYDFYAKNTVLYDQ 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0624 1241 Gene3D - 198 359 IPR027417 -
Prci7g0624 1241 Gene3D - 954 1112 IPR027417 -
Prci7g0624 1241 Gene3D Ribonuclease Inhibitor 550 734 IPR032675 -
Prci7g0624 1241 Gene3D - 770 953 IPR035897 -
Prci7g0624 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 455 IPR027417 -
Prci7g0624 1241 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 29 733 IPR044974 GO:0006952
Prci7g0624 1241 SUPERFAMILY L domain-like 502 727 - -
Prci7g0624 1241 PRINTS Disease resistance protein signature 227 242 - -
Prci7g0624 1241 PRINTS Disease resistance protein signature 303 317 - -
Prci7g0624 1241 PRINTS Disease resistance protein signature 396 410 - -
Prci7g0624 1241 PRINTS Disease resistance protein signature 703 719 - -
Prci7g0624 1241 SMART till_3 28 168 IPR000157 GO:0007165
Prci7g0624 1241 SMART till_3 776 926 IPR000157 GO:0007165
Prci7g0624 1241 FunFam Disease resistance protein (TIR-NBS-LRR class) 363 445 - -
Prci7g0624 1241 MobiDBLite consensus disorder prediction 1 23 - -
Prci7g0624 1241 Coils Coil 408 428 - -
Prci7g0624 1241 SUPERFAMILY Toll/Interleukin receptor TIR domain 768 929 IPR035897 -
Prci7g0624 1241 ProSiteProfiles TIR domain profile. 775 951 IPR000157 GO:0007165
Prci7g0624 1241 Gene3D - 26 197 IPR035897 -
Prci7g0624 1241 SMART AAA_5 224 360 IPR003593 GO:0016887
Prci7g0624 1241 SMART AAA_5 982 1138 IPR003593 GO:0016887
Prci7g0624 1241 SUPERFAMILY Toll/Interleukin receptor TIR domain 18 171 IPR035897 -
Prci7g0624 1241 ProSiteProfiles TIR domain profile. 27 193 IPR000157 GO:0007165
Prci7g0624 1241 FunFam Disease resistance protein (TIR-NBS-LRR class) 25 195 - -
Prci7g0624 1241 Gene3D - 361 445 IPR042197 -
Prci7g0624 1241 Gene3D - 1118 1196 IPR042197 -
Prci7g0624 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 957 1206 IPR027417 -
Prci7g0624 1241 Pfam Leucine Rich Repeat 614 632 IPR011713 -
Prci7g0624 1241 FunFam Disease resistance protein (TIR-NBS-LRR class) 773 952 - -
Prci7g0624 1241 Pfam NB-ARC domain 211 445 IPR002182 GO:0043531
Prci7g0624 1241 Pfam NB-ARC domain 966 1197 IPR002182 GO:0043531
Prci7g0624 1241 Pfam TIR domain 28 197 IPR000157 GO:0007165
Prci7g0624 1241 Pfam TIR domain 776 957 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0624 Prci-Chr7 23556132 23563494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0624 205 713 WRKY Transcription Factor Family AT5G45050 33.769 2.93e-77 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0624 - - pcin:129315230 2443.69