Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0622 ATGGATGATTTCGACCACAGTCCATCATCAAGGCCGATCGATCTCTATATCAGTTTTAGAGGAGTTGACGACTTCGACGCCTGTAAATTCATCTATCCCCTTTTTGCTGCTCTCAAGAGTGCTCTCGAAATCGACGGCTTGAGTGCTTTCTGGGACGACAAGAAGCTCGAAACAGCGAATTCTGACATTCCGCCTCATCATCTCCGAGCAATTCAACAATCCTGCATCTCCGTTGTGGTCTTCTCCAAAACCTTTGCTTCTTCTGTATGGTCCTTGCAGGAGCTTTCAGAGATTGCTGCTCGTATCAATGATCGGCGACACACTATTATACCAATTTTCTATGATGTGGATCCATCTGAGGTACGAAAACAGAAGAATGCCTACAAACAAGCCTTTGCTGAACATGAAGAAAGGTTCCCAGCAGATTTAGACCAGATAAACAGGTGGAGGAACGCTATGACTCAAGTAGCCAATCTGTGCGGTTGGCATGTACCATATGACCCAGGGTCATCATACTCGAAAGTTATTGATGATATCACCACAGATGTTAAGAAAAAAATGGGAGGAGTTATTAAGTCATATGAAGGAGATGGTATTTACCAAGTTAGATTGTTGACAAAGGAACAAGCTCTTCAACTCTTTTGTAAAACAGCTTTCAGACGTGATTATCCTGTAAGTGGTTATGAAGATCTGACCAACAGATTACTTGAACATACCAATTGCCATCCCTTGGCTGTTGTAATTTTGGGTTCATTCTTACATAAAAAAAGTGTTACAAAATGGAGGAGTGCCTTGAATCGGCTACCGAGAATTCCTGATAACCAGCAGATAATAATGGACGTGCTTAAGATAAGTTTTGATGATTTAGATGACAGGACTAAGGAAATCTTCTTGGACATTGCATGTTTCTTTGCAGGAAAGGACATTAATCATGTGAAGGAAATTTTGCAGCATTGTGGTTTTTCAGTAGATATTGGAATTGAAGTTTTGATTGAGAAATCATTTATGACCATTTCAAATGAGAGAATTAGAATGCATGATATGTTGCTAGAAATGGGAAAAGAAATTGTTCAACAGGAATCTCCTCTTGAGCCAGGAGAACGAAGTCGGTTGTGGCTTTTTGATGATATAAATCATGTTATGCAAGAAAACACAGCTTCAGAGAAGGTTGAAGCTATAGTGTTGAACTTGGAAGATTCAGAAGGGACTACTTTGAAGATTGAAGCTTTAGCACAAATGACTAACCTCAGAGTCCTCGTGCTTGAGAATGTAAATTTTGCTGGAACTCTCACCAGCCTTTCCAACAAGCTGAGATATGTTTCATGGCATCAATACCCTTGTACGTGTTTGCCATCAAATTTCGAGTCTTTTTCACTTGTTGAATTGATCATGCCTTACAGCAATGTCACAGAAATATGGGAAGGCAAAAAGGTGTTTCCAAATTTGAGAAATATGAACTTCCATGGCTCCAAAGCTTTGATTGGGACACCAGATTTTGGAGGAGTTCCAAATCTGGAGAGACTAGACCTTGAAGGATGCATTGGATTGTTGCAACTTCATCCATCAATTGCCAAACTTTCAAAGCTCAACTTCTTAAATTTGAGAAACTGCATTAATCTTGCTCAGATCCCCAAAGACATGTTTAGTCTTCCCTCTCTGGAAGATTTAAATATCATTCGCTGTCCAAAATTGAACATTGTTTGA 1704 0.3973 MDDFDHSPSSRPIDLYISFRGVDDFDACKFIYPLFAALKSALEIDGLSAFWDDKKLETANSDIPPHHLRAIQQSCISVVVFSKTFASSVWSLQELSEIAARINDRRHTIIPIFYDVDPSEVRKQKNAYKQAFAEHEERFPADLDQINRWRNAMTQVANLCGWHVPYDPGSSYSKVIDDITTDVKKKMGGVIKSYEGDGIYQVRLLTKEQALQLFCKTAFRRDYPVSGYEDLTNRLLEHTNCHPLAVVILGSFLHKKSVTKWRSALNRLPRIPDNQQIIMDVLKISFDDLDDRTKEIFLDIACFFAGKDINHVKEILQHCGFSVDIGIEVLIEKSFMTISNERIRMHDMLLEMGKEIVQQESPLEPGERSRLWLFDDINHVMQENTASEKVEAIVLNLEDSEGTTLKIEALAQMTNLRVLVLENVNFAGTLTSLSNKLRYVSWHQYPCTCLPSNFESFSLVELIMPYSNVTEIWEGKKVFPNLRNMNFHGSKALIGTPDFGGVPNLERLDLEGCIGLLQLHPSIAKLSKLNFLNLRNCINLAQIPKDMFSLPSLEDLNIIRCPKLNIV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0622 567 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 162 IPR035897 -
Prci7g0622 567 Gene3D - 204 290 IPR042197 -
Prci7g0622 567 Gene3D Ribonuclease Inhibitor 376 567 IPR032675 -
Prci7g0622 567 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 187 IPR044974 GO:0006952
Prci7g0622 567 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 300 IPR027417 -
Prci7g0622 567 ProSiteProfiles TIR domain profile. 11 187 IPR000157 GO:0007165
Prci7g0622 567 Pfam TIR domain 14 190 IPR000157 GO:0007165
Prci7g0622 567 Gene3D - 8 190 IPR035897 -
Prci7g0622 567 Pfam NB-ARC domain 197 287 IPR002182 GO:0043531
Prci7g0622 567 SUPERFAMILY "Winged helix" DNA-binding domain 278 381 IPR036390 -
Prci7g0622 567 SUPERFAMILY L domain-like 393 562 - -
Prci7g0622 567 Pfam Leucine Rich Repeat 459 477 IPR011713 -
Prci7g0622 567 SMART till_3 12 159 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0622 Prci-Chr7 23540513 23544090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0622 199 558 WRKY Transcription Factor Family AT5G45050 33.075 5.29e-58 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0622 - - pcin:129315106 1147.11