Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0621 ATGGATGATTTCGACCACAGTCCATCATCAAGGCCGATCGATCTCTATATCAGTTTTAGAGGAGTTGACGACTTCGACGCCTGTAAATTCATCTATCCCCTTTTTGCTGCTCTCAAGAGTGCTCTCGAAATCGACGGCTTGAGTGCTTTCTGGGACGACAAGAAGCTCGAAACAGCGAATTCTGACATTCCGCCTCATCATCTCCGAGCAATTCAACAATCCTGCATCTCCGTTGTGGTCTTCTCCAAAACCTTTGCTTCTTCTGTATGGTCCTTGCAGGAGCTTTCAGAGATTGCTGCTCGTATCAATGATCGGCGACACACTATTATACCAATTTTCTATGATGTGGATCCATCTGAGGTACGAAAACAGAAGAATGCCTACAAACAAGCCTTTGCTGAACATGAAGAAAGGTTCCCAGCAGATTTAGACCAGATAAACAGGTGGAGGAACGCTATGACTCAAGTAGCCAATCTGTGCGGTTGGCATGTACCATATGACCCAGGGTCATCATACTCGAAAGTTATTGATGATATCACCACAGATGTTAAGAAAAAAATGGGAGGAGTTATTAAGTCATATGAAGGAGATGGTATTTACCAAGTTAGATTGTTGACAAAGGAACAAGCTCTTCAACTCTTTTGTAAAACAGCTTTCAGACGTGATTATCCTGCTTCAGAGAAGGTTGAAGCTATAGTGTTGAACTTGGAAGATTCAGAAGGGACTACTTTGAAGATTGAAGCTTTAGCACAAATGACTAACCTCAGAGTCCTCGTGCTTGAGAATGTAAATTTTGCTGGAACTCTCACCAGCCTTTCCAACAAGCTGAGATATGTTTCATGGCATCAATACCCTTGTACGTGTTTGCCATCAAATTTCGAGTCTTTTTCACTTGTTGAATTGATCATGCCTTACAGCAATGTCACAGAAATATGGGAAGGCAAAAAGGTGTTTCCAAATTTGAGAAATATGAACTTCCATGGCTCCAAAGCTTTGATTGGGACACCAGATTTTGGAGGAGTTCCAAATCTGGAGAGACTAGACCTTGAAGGATGCATTGGATTGTTGCAACTTCATCCATCAATTGCCAAACTTTCAAAGCTCAACTTCTTAAATTTGAGAAACTGCATTAATCTTGCTCAGATCCCCAAAGACATGTTTAGTCTTCCCTCTCTGGAAGATTTAAATATCATTCGCTGTCCAAAATTGAACATTGTTTGA 1221 0.4128 MDDFDHSPSSRPIDLYISFRGVDDFDACKFIYPLFAALKSALEIDGLSAFWDDKKLETANSDIPPHHLRAIQQSCISVVVFSKTFASSVWSLQELSEIAARINDRRHTIIPIFYDVDPSEVRKQKNAYKQAFAEHEERFPADLDQINRWRNAMTQVANLCGWHVPYDPGSSYSKVIDDITTDVKKKMGGVIKSYEGDGIYQVRLLTKEQALQLFCKTAFRRDYPASEKVEAIVLNLEDSEGTTLKIEALAQMTNLRVLVLENVNFAGTLTSLSNKLRYVSWHQYPCTCLPSNFESFSLVELIMPYSNVTEIWEGKKVFPNLRNMNFHGSKALIGTPDFGGVPNLERLDLEGCIGLLQLHPSIAKLSKLNFLNLRNCINLAQIPKDMFSLPSLEDLNIIRCPKLNIV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0621 406 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 162 IPR035897 -
Prci7g0621 406 ProSiteProfiles TIR domain profile. 11 187 IPR000157 GO:0007165
Prci7g0621 406 Pfam TIR domain 14 190 IPR000157 GO:0007165
Prci7g0621 406 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 187 IPR044974 GO:0006952
Prci7g0621 406 SUPERFAMILY L domain-like 233 401 - -
Prci7g0621 406 Gene3D Ribonuclease Inhibitor 227 406 IPR032675 -
Prci7g0621 406 Gene3D - 8 190 IPR035897 -
Prci7g0621 406 Pfam Leucine Rich Repeat 298 316 IPR011713 -
Prci7g0621 406 SMART till_3 12 159 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0621 Prci-Chr7 23540513 23544090 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0621 225 404 WRKY Transcription Factor Family AT4G12020 37.000 6.01e-21 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0621 - - pcin:129315106 462.611