Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0620 ATGAATTCCACCAGCGTCGAAGGGGGCAGCTCGTCATCTCGGACGACTCCAGAGTGTGAAGTGTTTCTGAATTACTGTGGCGTCGACGCGTACAATTGTTTCATCTCTCATCTTGACTCTGCTCTTCAACGAAACGGTATATCCACCTCCAACCAATGTCTTCAAAGAGGAGATCTCATTTCACAAGTTCTTCTCAAAGCAATTGAGCAATCCAGGATTTATATTGTTGTCTTCTCCAAACACTACGCTGATTCAACATGGTGCTTGGACGAACTAAGAAAGATCTCTGAGGTAATTTTCGATGGGGAATGCACCATTCTACCAGTTTTTTACCATGTCGATCCATATGAGGTACAAAACCAGTGTGGGAGCTTCAAATTAGCCTTTGATGAACATGAACAAAAGTTCAGTGATAATATAGAGAAGGTACAAAGATGGAGACTAGCCTTGACTCAAATAGCAAAACTCCCTGGTTGCGATGTACGGACTCATTTGTTCTCTCTCGCTAGATCAGAGTCAGAAGTTGTTGGTAACATCGTTAATGTAATCAGAAGCAAATTGGGTCACATAATGGATGAGACTAGTGTCCAAGACAGCATAATGGCATGCGAAGTGTTTCTGAGTTTCCACGAGGACATTCGCAACGGCTTCATTTCTCATCTTGTTTCAGCTCTTCAACGAAAAGGTCTGTTGACGACCATCGTGGATGACGAAGAAAGGATCCAGAGAGGAGATTCATCCAGTTCGGAAAAGCTACTTATAGCAATCGCTGCATCCCGAATTTGTGTTGTTGTCTTATCTAAAAAATATGCTGCTTCACCACGGTGCTTGGAAGAACTATCATGGATTTGTAATAGAAAGCTTGGTTCAGGATGCATTTGCCCAGTTTTCTACGATGTGCGTTCATCAGATGTAAGACATCAGAAAGGGGATATCGAAGAAGCCTTTGCTAGCCATGAGCAAAGATTTAGTGATGATATGGAGAAGGTACAAAGATGGAGGCTAGCTCTCACTGAAGTAGCAAATCTCTCCGGTTTTGCGGTAGGAAATAAATCAGAGGCAGAGGTTATCGATTCCATTGTAGAGGAAACGAGAAGATTGATTAGGAAAAGAAGATATCAGAGGACCTGGAAATATGAAGTGTTTCTGAGTTTCAGAGGCGAGGACACTCGAAAAGGTTTCACTGCTCATCTTTTTTCAGCTCTTCAACGAAAAGGTGTATTTGTCTTCAAGGATGACCAACGACTTCAGAAAGGGGATTCCATTTCACAAGAGCTTCTCGAAGCAATTGAGCAATCCAGGATTTGTATTGTTGTCTTCTCCAAACACTACGCTGATTCAACATGGTGCTTGGAAGAACTGACAAAGATCTCTGAGGTAATTTTCGATGGGGGATGCACTGTTTTACCAGTTTTTTACGATGTGGATCCATTTGAGGTACAAACTCAGAGTGGCGGGACTTTTAAAGAATCTTTTGATGCATATGAGCAAAACTTGAGTGATAATATAGAGAAGGTACAAAGATGGAGGCTAGCTCTCACTCAGGTAGCAAATCTCTCTGGTTTTGATGTACGAAATAAATCAGAGATGAAAGTGATTGATAACATTGTTGATAGAGCCATAAGGGAATTGGATCATAGAATCTCAAGTTTGACCGATGATCTTGTTGGGATGCAATCTCGTGTTGAAGCTTTAGAAAACTTTCTAAATTTAGACCCAGATGAAGTTCGATCTGTTGGGCTCTTTGGAATGCCCGGAATAGGGAAGACTACTCTTGCTGCAGTTTTGTTCAACAAGATCTCCTACCAATTTGATGCTTCTTGCTTCCTTCATGATGTAAGTGGAGTCGAACAGCGTTTTGGCATAATCCATTTACAACAACAGCTCCTTTCTGAAACACTACTACGTAAAGATGTGCCTGTGAAAGACCCTTATGTGGGAAGACATATCATTATGATGAGGCTTTCAACCCGTAAAATTCTTGTGGTTGTAGATAACGTTAATAGTATATCACAATTGGACAATTTGGTTGGACAGCCAGACTGGTTTGGTTCAGGGAGTAGAATCATCATTACAACTAGGGATGAGCATATACTATTATCGCGTGGCGTGTATGTATTCAACAGGATCGAACTATTAGAGCATCATGATGCTCTTCAACTTTTTTGCGTAAAAGCTTTCAACTGCGATGATCCCCCGAGTGAGTTTCAAGACTTGGCCAATGCTCTACTTCAACATGCCAAGTGCCTTCCATTAGCAATTAAAGTGTTGGGTTCCCGTTTGTTTATGAAACAAAAATCAGAGTGGAGCGCCGAGTTAGAAAGATTGAAAGAAATTCCTGACAGAGATGTTATGGAAGTTCTTCAAACTAGTTATGATCTACTTGATTACGGGGTAAAAAATGTATTTCTTGATATTGCTTGTTTCTTTAATGGAGCAGACAAGGACCATGTTATGAATATTATGGAGTACTGTGGATTTTATGCTATATATGCAACTCATATTCTCTGTGAACGATCACTCGCAAGCATTGTCAACGGAAAAATCTGGATGCATGATTTGGTGCAAGAACTGGGACAAAAAATTGTTCGAGAAAAATCTCCTCAACATGCCAAAAGAAGTAGGTTGTGGTCATACAAAGATCTCCAATCTGTAAACAAAGGAACAAAATTTGTCGAAGCTATCGTTCTGAACAAAGGAGAAGTTGAGCAAAAGATTCCATTAATGGCTGAAGTTTTATCAAAAATGACCCGCCTCAGAGTTTTGATACTGCCTGCATTGAAGTTTTCAGGACAATTGAATCATCTTTCCAATGACTTACGATTTCTTTCATGGCAAAAATTTCCTTTCAGCTATTTACCATCAAGTTTTAATCCAAAAAATCTTGTTGAGTTGATCATGCCAGACAGTGATATAAGACACTTGTGGAAAGGGAGAAAGTGTCTGCCAAGTTTGAGAAGCATAGATCTAAGTGGTTCTAAAAGTCTAGTGGAGACTCTAGATCTTAGTGGTGCAGAGTCTCTTAAGAAAATAAATCTTGAAGGATGTACCGGATTATTGCGGGTTCACCCATCTATTGGAGATCTTCATCAGCTTGAATTCTTGAATCTGAGAAAGTGCACTCATTTGACCAGGATCCCAAACACCATACTTCTTTTACCTTCTCTTGAAACTCTGAACCTCTGTCACTGTTCAAGCCTCCGTGAAATATTTCAAGCGAGGGATTTCTCATCAATGGAAGACGAAGAATAG 3252 0.4031 MNSTSVEGGSSSSRTTPECEVFLNYCGVDAYNCFISHLDSALQRNGISTSNQCLQRGDLISQVLLKAIEQSRIYIVVFSKHYADSTWCLDELRKISEVIFDGECTILPVFYHVDPYEVQNQCGSFKLAFDEHEQKFSDNIEKVQRWRLALTQIAKLPGCDVRTHLFSLARSESEVVGNIVNVIRSKLGHIMDETSVQDSIMACEVFLSFHEDIRNGFISHLVSALQRKGLLTTIVDDEERIQRGDSSSSEKLLIAIAASRICVVVLSKKYAASPRCLEELSWICNRKLGSGCICPVFYDVRSSDVRHQKGDIEEAFASHEQRFSDDMEKVQRWRLALTEVANLSGFAVGNKSEAEVIDSIVEETRRLIRKRRYQRTWKYEVFLSFRGEDTRKGFTAHLFSALQRKGVFVFKDDQRLQKGDSISQELLEAIEQSRICIVVFSKHYADSTWCLEELTKISEVIFDGGCTVLPVFYDVDPFEVQTQSGGTFKESFDAYEQNLSDNIEKVQRWRLALTQVANLSGFDVRNKSEMKVIDNIVDRAIRELDHRISSLTDDLVGMQSRVEALENFLNLDPDEVRSVGLFGMPGIGKTTLAAVLFNKISYQFDASCFLHDVSGVEQRFGIIHLQQQLLSETLLRKDVPVKDPYVGRHIIMMRLSTRKILVVVDNVNSISQLDNLVGQPDWFGSGSRIIITTRDEHILLSRGVYVFNRIELLEHHDALQLFCVKAFNCDDPPSEFQDLANALLQHAKCLPLAIKVLGSRLFMKQKSEWSAELERLKEIPDRDVMEVLQTSYDLLDYGVKNVFLDIACFFNGADKDHVMNIMEYCGFYAIYATHILCERSLASIVNGKIWMHDLVQELGQKIVREKSPQHAKRSRLWSYKDLQSVNKGTKFVEAIVLNKGEVEQKIPLMAEVLSKMTRLRVLILPALKFSGQLNHLSNDLRFLSWQKFPFSYLPSSFNPKNLVELIMPDSDIRHLWKGRKCLPSLRSIDLSGSKSLVETLDLSGAESLKKINLEGCTGLLRVHPSIGDLHQLEFLNLRKCTHLTRIPNTILLLPSLETLNLCHCSSLREIFQARDFSSMEDEE 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0620 1083 Pfam TIR domain 205 364 IPR000157 GO:0007165
Prci7g0620 1083 Pfam TIR domain 21 198 IPR000157 GO:0007165
Prci7g0620 1083 Pfam TIR domain 378 547 IPR000157 GO:0007165
Prci7g0620 1083 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 158 IPR035897 -
Prci7g0620 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 806 IPR027417 -
Prci7g0620 1083 Gene3D Ribonuclease Inhibitor 880 1080 IPR032675 -
Prci7g0620 1083 PRINTS Disease resistance protein signature 747 761 - -
Prci7g0620 1083 PRINTS Disease resistance protein signature 578 593 - -
Prci7g0620 1083 PRINTS Disease resistance protein signature 654 668 - -
Prci7g0620 1083 PRINTS Disease resistance protein signature 980 996 - -
Prci7g0620 1083 SUPERFAMILY "Winged helix" DNA-binding domain 783 883 IPR036390 -
Prci7g0620 1083 SUPERFAMILY Toll/Interleukin receptor TIR domain 370 522 IPR035897 -
Prci7g0620 1083 ProSiteProfiles TIR domain profile. 377 544 IPR000157 GO:0007165
Prci7g0620 1083 Gene3D - 374 546 IPR035897 -
Prci7g0620 1083 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 379 1071 IPR044974 GO:0006952
Prci7g0620 1083 Gene3D - 712 796 IPR042197 -
Prci7g0620 1083 SUPERFAMILY L domain-like 909 1068 - -
Prci7g0620 1083 FunFam Disease resistance protein (TIR-NBS-LRR class) 375 546 - -
Prci7g0620 1083 ProSiteProfiles TIR domain profile. 17 187 IPR000157 GO:0007165
Prci7g0620 1083 Gene3D - 201 373 IPR035897 -
Prci7g0620 1083 Gene3D - 17 193 IPR035897 -
Prci7g0620 1083 Gene3D - 547 703 IPR027417 -
Prci7g0620 1083 SMART till_3 18 156 IPR000157 GO:0007165
Prci7g0620 1083 SMART till_3 378 519 IPR000157 GO:0007165
Prci7g0620 1083 SMART till_3 202 343 IPR000157 GO:0007165
Prci7g0620 1083 Pfam NB-ARC domain 560 778 IPR002182 GO:0043531
Prci7g0620 1083 SMART AAA_5 575 711 IPR003593 GO:0016887
Prci7g0620 1083 SUPERFAMILY Toll/Interleukin receptor TIR domain 203 346 IPR035897 -
Prci7g0620 1083 ProSiteProfiles TIR domain profile. 201 368 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0620 Prci-Chr7 23508606 23513317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0620 556 1061 WRKY Transcription Factor Family AT5G45050 33.708 3.67e-83 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0620 - - pcin:129316221 2151.71