Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0618 ATGAATTCCACCAGCGTCGAAGGGGGCAGCTCGTCATCTCGGACGACTCCAGAGTGTGAAGTGTTTCTGAATTACTGTGGCGTCGACGCGTACAATTGTTTCATCTCTCATCTTGACTCTGCTCTTCAACGAAACGGTATATCCACCTCCAACCAATGTCTTCAAAGAGGAGATCTCATTTCACAAGTTCTTCTCAAAGCAATTGAGCAATCCAGGATTTATATTGTTGTCTTCTCCAAACACTACGCTGATTCAACATGGTGCTTGGACGAACTAAGAAAGATCTCTGAGGTAATTTTCGATGGGGAATGCACCATTCTACCAGTTTTTTACCATGTCGATCCATATGAGGTACAAAACCAGTGTGGGAGCTTCAAATTAGCCTTTGATGAACATGAACAAAAGTTCAGTGATAATATAGAGAAGGTACAAAGATGGAGACTAGCCTTGACTCAAATAGCAAAACTCCCTGGTTGCGATGTACGGACTCAAAGCAAATTGGGTCACATAATGGATGAGACTAGTGTCCAAGACAGCATAATGGCATGCGAAGTGTTTCTGAGTTTCCACGAGGACATTCGCAACGGCTTCATTTCTCATCTTGTTTCAGCTCTTCAACGAAAAGGTCTGTTGACGACCATCGTGGATGACGAAGAAAGGATCCAGAGAGGAGATTCATCCAGTTCGGAAAAGCTACTTATAGCAATCGCTGCATCCCGAATTTGTGTTGTTGTCTTATCTAAAAAATATGCTGCTTCACCACGGTGCTTGGAAGAACTATCATGGATTTGTAATAGAAAGCTTGGTTCAGGATGCATTTGCCCAGTTTTCTACGATGTGCGTTCATCAGATGTAAGACATCAGAAAGGGGATATCGAAGAAGCCTTTGCTAGCCATGAGCAAAGATTTAGTGATGATATGGAGAAGGTACAAAGATGGAGGCTAGCTCTCACTGAAGTAGCAAATCTCTCCGGTTTTGCGGTAGGAAATAAATCAGAGGCAGAGGTTATCGATTCCATTGTAGAGGAAACGAGAAGATTGATTAGGAAAAGAAGATATCAGAGGACCTGGAAATATGAAGTGTTTCTGAGTTTCAGAGGCGAGGACACTCGAAAAGGTTTCACTGCTCATCTTTTTTCAGCTCTTCAACGAAAAGGTGTATTTGTCTTCAAGGATGACCAACGACTTCAGAAAGGGGATTCCATTTCACAAGAGCTTCTCGAAGCAATTGAGCAATCCAGGATTTGTATTGTTGTCTTCTCCAAACACTACGCTGATTCAACATGGTGCTTGGAAGAACTGACAAAGATCTCTGAGGTAATTTTCGATGGGGGATGCACTGTTTTACCAGTTTTTTACGATGTGGATCCATTTGAGGTACAAACTCAGAGTGGCGGGACTTTTAAAGAATCTTTTGATGCATATGAGCAAAACTTGAGTGATAATATAGAGAAGGTACAAAGATGGAGGCTAGCTCTCACTCAGGTAGCAAATCTCTCTGGTTTTGATGTACGAAATAAATCAGAGATGAAAGTGATTGATAACATTGTTGATAGAGCCATAAGGGAATTGGATCATAGAATCTCAAGTTTGACCGATGATCTTGTTGGGATGCAATCTCGTGTTGAAGCTTTAGAAAACTTTCTAAATTTAGACCCAGATGAAGTTCGATCTGTTGGGCTCTTTGGAATGCCCGGAATAGGGAAGACTACTCTTGCTGCAGTTTTGTTCAACAAGATCTCCTACCAATTTGATGCTTCTTGCTTCCTTCATGATGTAAGTGGAGTCGAACAGCGTTTTGGCATAATCCATTTACAACAACAGCTCCTTTCTGAAACACTACTACGTAAAGATGTGCCTGTGAAAGACCCTTATGTGGGAAGACATATCATTATGATGAGGCTTTCAACCCGTAAAATTCTTGTGGTTGTAGATAACGTTAATAGTATATCACAATTGGACAATTTGGTTGGACAGCCAGACTGGTTTGGTTCAGGGAGTAGAATCATCATTACAACTAGGGATGAGCATATACTATTATCGCGTGGCGTGTATGTATTCAACAGGATCGAACTATTAGAGCATCATGATGCTCTTCAACTTTTTTGCGTAAAAGCTTTCAACTGCGATGATCCCCCGAGTGAGTTTCAAGACTTGGCCAATGCTCTACTTCAACATGCCAAGTGCCTTCCATTAGCAATTAAAGTGTTGGGTTCCCGTTTGTTTATGAAACAAAAATCAGAGTGGAGCGCCGAGTTAGAAAGATTGAAAGAAATTCCTGACAGAGATGTTATGGAAGTTCTTCAAACTAGTTATGATCTACTTGATTACGGGGTAAAAAATGTATTTCTTGATATTGCTTGTTTCTTTAATGGAGCAGACAAGGACCATGTTATGAATATTATGGAGTACTGTGGATTTTATGCTATATATGCAACTCATATTCTCTGTGAACGATCACTCGCAAGCATTGTCAACGGAAAAATCTGGATGCATGATTTGGTGCAAGAACTGGGACAAAAAATTGTTCGAGAAAAATCTCCTCAACATGCCAAAAGAAGTAGGTTGTGGTCATACAAAGATCTCCAATCTGTAAACAAAGGAACAAAATTTGTCGAAGCTATCGTTCTGAACAAAGGAGAAGTTGAGCAAAAGATTCCATTAATGGCTGAAGTTTTATCAAAAATGACCCGCCTCAGAGTTTTGATACTGCCTGCATTGAAGTTTTCAGGACAATTGAATCATCTTTCCAATGACTTACGATTTCTTTCATGGCAAAAATTTCCTTTCAGCTATTTACCATCAAGTTTTAATCCAAAAAATCTTGTTGAGTTGATCATGCCAGACAGTGATATAAGACACTTGTGGAAAGGGAGAAAGTGTCTGCCAAGTTTGAGAAGCATAGATCTAAGTGGTTCTAAAAGTCTAGTGGAGACTCTAGATCTTAGTGGTGCAGAGTCTCTTAAGAAAATAAATCTTGAAGGATGTACCGGATTATTGCGGGTTCACCCATCTATTGGAGATCTTCATCAGCTTGAATTCTTGAATCTGAGAAAGTGCACTCATTTGACCAGGATCCCAAACACCATACTTCTTTTACCTTCTCTTGAAACTCTGAACCTCTGTCACTGTTCAAGCCTCCGTGAAATATTTCAAGCGAGGGATTTCTCATCAATGGAAGACGAAGAATAG 3192 0.4035 MNSTSVEGGSSSSRTTPECEVFLNYCGVDAYNCFISHLDSALQRNGISTSNQCLQRGDLISQVLLKAIEQSRIYIVVFSKHYADSTWCLDELRKISEVIFDGECTILPVFYHVDPYEVQNQCGSFKLAFDEHEQKFSDNIEKVQRWRLALTQIAKLPGCDVRTQSKLGHIMDETSVQDSIMACEVFLSFHEDIRNGFISHLVSALQRKGLLTTIVDDEERIQRGDSSSSEKLLIAIAASRICVVVLSKKYAASPRCLEELSWICNRKLGSGCICPVFYDVRSSDVRHQKGDIEEAFASHEQRFSDDMEKVQRWRLALTEVANLSGFAVGNKSEAEVIDSIVEETRRLIRKRRYQRTWKYEVFLSFRGEDTRKGFTAHLFSALQRKGVFVFKDDQRLQKGDSISQELLEAIEQSRICIVVFSKHYADSTWCLEELTKISEVIFDGGCTVLPVFYDVDPFEVQTQSGGTFKESFDAYEQNLSDNIEKVQRWRLALTQVANLSGFDVRNKSEMKVIDNIVDRAIRELDHRISSLTDDLVGMQSRVEALENFLNLDPDEVRSVGLFGMPGIGKTTLAAVLFNKISYQFDASCFLHDVSGVEQRFGIIHLQQQLLSETLLRKDVPVKDPYVGRHIIMMRLSTRKILVVVDNVNSISQLDNLVGQPDWFGSGSRIIITTRDEHILLSRGVYVFNRIELLEHHDALQLFCVKAFNCDDPPSEFQDLANALLQHAKCLPLAIKVLGSRLFMKQKSEWSAELERLKEIPDRDVMEVLQTSYDLLDYGVKNVFLDIACFFNGADKDHVMNIMEYCGFYAIYATHILCERSLASIVNGKIWMHDLVQELGQKIVREKSPQHAKRSRLWSYKDLQSVNKGTKFVEAIVLNKGEVEQKIPLMAEVLSKMTRLRVLILPALKFSGQLNHLSNDLRFLSWQKFPFSYLPSSFNPKNLVELIMPDSDIRHLWKGRKCLPSLRSIDLSGSKSLVETLDLSGAESLKKINLEGCTGLLRVHPSIGDLHQLEFLNLRKCTHLTRIPNTILLLPSLETLNLCHCSSLREIFQARDFSSMEDEE 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0618 1063 Gene3D - 354 526 IPR035897 -
Prci7g0618 1063 SMART AAA_5 555 691 IPR003593 GO:0016887
Prci7g0618 1063 Gene3D - 182 353 IPR035897 -
Prci7g0618 1063 Gene3D - 17 181 IPR035897 -
Prci7g0618 1063 ProSiteProfiles TIR domain profile. 17 148 IPR000157 GO:0007165
Prci7g0618 1063 SUPERFAMILY "Winged helix" DNA-binding domain 763 863 IPR036390 -
Prci7g0618 1063 Pfam NB-ARC domain 540 758 IPR002182 GO:0043531
Prci7g0618 1063 ProSiteProfiles TIR domain profile. 181 348 IPR000157 GO:0007165
Prci7g0618 1063 FunFam Disease resistance protein (TIR-NBS-LRR class) 355 526 - -
Prci7g0618 1063 Pfam TIR domain 21 167 IPR000157 GO:0007165
Prci7g0618 1063 Pfam TIR domain 358 527 IPR000157 GO:0007165
Prci7g0618 1063 Pfam TIR domain 185 344 IPR000157 GO:0007165
Prci7g0618 1063 Gene3D - 692 776 IPR042197 -
Prci7g0618 1063 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 527 786 IPR027417 -
Prci7g0618 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 350 502 IPR035897 -
Prci7g0618 1063 SMART till_3 18 156 IPR000157 GO:0007165
Prci7g0618 1063 SMART till_3 182 323 IPR000157 GO:0007165
Prci7g0618 1063 SMART till_3 358 499 IPR000157 GO:0007165
Prci7g0618 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 158 IPR035897 -
Prci7g0618 1063 Gene3D Ribonuclease Inhibitor 860 1060 IPR032675 -
Prci7g0618 1063 SUPERFAMILY L domain-like 889 1048 - -
Prci7g0618 1063 SUPERFAMILY Toll/Interleukin receptor TIR domain 183 326 IPR035897 -
Prci7g0618 1063 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 359 1051 IPR044974 GO:0006952
Prci7g0618 1063 Gene3D - 527 683 IPR027417 -
Prci7g0618 1063 PRINTS Disease resistance protein signature 558 573 - -
Prci7g0618 1063 PRINTS Disease resistance protein signature 727 741 - -
Prci7g0618 1063 PRINTS Disease resistance protein signature 960 976 - -
Prci7g0618 1063 PRINTS Disease resistance protein signature 634 648 - -
Prci7g0618 1063 ProSiteProfiles TIR domain profile. 357 524 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0618 Prci-Chr7 23508606 23513317 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0618 536 1041 WRKY Transcription Factor Family AT5G45050 33.708 2.55e-83 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0618 - - pcin:129316221 2101.63