Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0605 ATGGAGAAGAAAAACAAGAATAGTGGTGGCAAGATCTGTGTCATCTGCTATAAGTTTTTTACTAGTGGAAAAGCCTTGGGAGGGCACATGAGGACTCACCTTGCAAAACTTCCGATCCCTCCCAAGCCTGCTCCAATAACTCCGACTACAGATCTTATGCCTTCAAAAATATCCAAAGTTGATGTCGATGGGGGTTCGTCCTTAATCCATCAACACTCAATCTCTTCCTCACCAAAAAGTCTTCTGAAGATGAATTCACTAACTAAACAAAACTTTTACTCTATGAATCAAGACTTTGCAATAAAATTTTCAAACCCTGGCGATGATCAGAGAAGCAAATCAGATCAATCTTACCAGACTGGAAAAAGATCCAAACGTTGCCGCAAAATTCATGATGCAACAAGAGCAGTAATGTTGCCGCCTAAGACAAAAGCTAATCGAAATCAAACAGGTTTGATGTTTAATTCTTACGTTCAAGTTGTAGATGCTGCTTTAACTCTCATGATACTTTCCAAGGATAAATGGCCTACAAGAAAAGAATTGATCGAGAAAAAACAAGCGAAGGGTGAGAATGAACAAGAAGACTCATATGCAAAGGTTCATTCTCATGGTGAAAGGTTCGAGTGTGAGACATGCAACAAAGTTTTTAGATCTTACCAGGCTCTTGGTGGGCACAAAGCAAGCCACAAAAAGGTCTTCAAGAATGATCAATTAGAGGTAGATGGTGAATTTGATGAAGAAATTGGGGATGATGGTAACTGGGGGAATAATAATGATGCTCTTAAAGATCCCAAAATGCTTAAGTGCCTTACTGCTTCAAAGTGTTTGAGTCTAGCCAAGGACTTGGAAGACACAAGAAGATACACTCTCCTAAAGCTATGA 882 0.3946 MEKKNKNSGGKICVICYKFFTSGKALGGHMRTHLAKLPIPPKPAPITPTTDLMPSKISKVDVDGGSSLIHQHSISSSPKSLLKMNSLTKQNFYSMNQDFAIKFSNPGDDQRSKSDQSYQTGKRSKRCRKIHDATRAVMLPPKTKANRNQTGLMFNSYVQVVDAALTLMILSKDKWPTRKELIEKKQAKGENEQEDSYAKVHSHGERFECETCNKVFRSYQALGGHKASHKKVFKNDQLEVDGEFDEEIGDDGNWGNNNDALKDPKMLKCLTASKCLSLAKDLEDTRRYTLLKL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0605 293 Pfam C2H2-type zinc finger 12 35 - -
Prci7g0605 293 Pfam C2H2-type zinc finger 206 231 - -
Prci7g0605 293 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 11 274 IPR044303 GO:0006355
Prci7g0605 293 ProSitePatterns Zinc finger C2H2 type domain signature. 13 33 IPR013087 -
Prci7g0605 293 ProSitePatterns Zinc finger C2H2 type domain signature. 209 229 IPR013087 -
Prci7g0605 293 ProSiteProfiles Zinc finger C2H2 type domain profile. 207 229 IPR013087 -
Prci7g0605 293 MobiDBLite consensus disorder prediction 103 127 - -
Prci7g0605 293 SUPERFAMILY beta-beta-alpha zinc fingers 12 229 IPR036236 -
Prci7g0605 293 ProSiteProfiles Zinc finger C2H2 type domain profile. 11 38 IPR013087 -
Prci7g0605 293 SMART c2h2final6 11 33 IPR013087 -
Prci7g0605 293 SMART c2h2final6 207 229 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0605 Prci-Chr7 23382996 23383877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0605 1 241 C2H2 Transcription Factor Family AT1G02030 30.041 8.90e-18 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci7g0605 zf-C2H2_6 1.2e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0605 - - pcin:129316597 561.222