Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0580 ATGGACCTGAAGTCGAATCACACTCCTGTTCTTACTGATGCCGCGCCCATAACGAAATCAAGATTGAGGGTGCCTTCCAGTCTGTTGCCTTATTCTCCTACAGGGGCAGCTTTTCCACCTGGCCGGCCTCTGACAATTCCTTGGAAGAAGACAGGACTTCTTGATGATGTTCGTTCAAGTGGTTGGCTGGATGCCATGAAATCATCTTCTCCTACAGCCAAGAAGATAACAAAGGATATCAACCATGGTTTTGCATCATCTGATGCTGATAGTGCTTACTGTACCTGGCTGTTAAAGTATCCGTCAGCACTTACTTCTTTTGAGCAAATTACAAACTATGCAAAAGGCAAGAGAATAGCATTGTTTTTGGATTATGATGGAACTCTTTCACCAATTGTGGATAATCCTGAATGTGCTTTCATGTCCGACAATATGCGTGCTGCTGTCAAAAAAGTGGCAGAACTTTTTCCCACTGCAATAATTAGTGGAAGAAGCCGTGACAAGGTATATGAATTTGTAGGACTAACTGAACTCTATTATGCTGGTAGCCACGGGATGGACATCATTGGTCCTGTTAGACAATCTGTATCTGATAACCATCCTAATTGCATTAGGTCTACTGACAATCAGGGAAAGGAAGTTAATTTATTCCAAACTGCTGCTGAATTCTTGCCCATGATTGATGAGGTGATGAGTTCCCTTATTGAATGTACAAAAGATATAAAAGGAGCAAAAGTTGAGAACAATAAATTTTGTGTCTCTGTGCACTACCGCAATGTAGAGGAGAAGAACTGGCATATAGTGGGGCAAAGAGTCACTGATATTCTAAAGGACTATCCGCGTTTGCGACTAACCCATGGGCGCAAGGTTTTAGAGGTCCGACCAGTGATCAATTGGGATAAGGGGAAAGCTGTGACATTTTTACTTGAGTCACTTGGGCTTAACAACTGTGATGATGTGCTCCCTATATATGTTGGAGATGATCGGACCGATGAAGATGCTTTTAAGGTTTTGAAGGAGGGACATAAAGGTTATGGCATCTTAGTTGCTTCAGCACCAAAGGAAAGTAATGCAGTCTACTCTCTTCATGATCCATCAGAGGTCATGGAATTTCTCAAGTCTCTTGTGGTTTGGAAGTCAGGCCTCCTTAAAAGCTACATATAG 1164 0.4227 MDLKSNHTPVLTDAAPITKSRLRVPSSLLPYSPTGAAFPPGRPLTIPWKKTGLLDDVRSSGWLDAMKSSSPTAKKITKDINHGFASSDADSAYCTWLLKYPSALTSFEQITNYAKGKRIALFLDYDGTLSPIVDNPECAFMSDNMRAAVKKVAELFPTAIISGRSRDKVYEFVGLTELYYAGSHGMDIIGPVRQSVSDNHPNCIRSTDNQGKEVNLFQTAAEFLPMIDEVMSSLIECTKDIKGAKVENNKFCVSVHYRNVEEKNWHIVGQRVTDILKDYPRLRLTHGRKVLEVRPVINWDKGKAVTFLLESLGLNNCDDVLPIYVGDDRTDEDAFKVLKEGHKGYGILVASAPKESNAVYSLHDPSEVMEFLKSLVVWKSGLLKSYI 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0580 387 NCBIfam trehalose-phosphatase 116 376 IPR003337 GO:0003824|GO:0005992
Prci7g0580 387 Gene3D - 217 381 IPR023214 -
Prci7g0580 387 Gene3D - 119 213 IPR023214 -
Prci7g0580 387 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 380 IPR044651 GO:0004805|GO:0005992
Prci7g0580 387 NCBIfam HAD-IIB family hydrolase 121 340 IPR006379 -
Prci7g0580 387 CDD HAD_TPP 120 370 - -
Prci7g0580 387 SUPERFAMILY HAD-like 120 377 IPR036412 -
Prci7g0580 387 Pfam Trehalose-phosphatase 122 366 IPR003337 GO:0003824|GO:0005992
Prci7g0580 387 FunFam Trehalose 6-phosphate phosphatase 119 209 - -
Prci7g0580 387 FunFam Trehalose 6-phosphate phosphatase 220 296 - -
Prci7g0580 387 FunFam Trehalose 6-phosphate phosphatase 226 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0580 Prci-Chr7 22982961 22989580 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0580 113 375 Trehalose Biosynthesis Gene Families AT1G70290 26.502 6.50e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0580 K01087 - gmx:100775207 671.774