Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0551 ATGGGAGATAAGCACGAAGAGAATCGGACTGAGAGCAGCGATTTCACTTCAGAGGATGAAGGCACCGAGGACTATCGACGGGGAGGTTACCACGCTGTGCGAATCGGCGATACCTTCAAGAATGGTCGCTATGTTGTTCAGAGCAAGCTCGGCTGGGGGCATTTCTCCACCGTCTGGCTCGCCTGGGACATCCAACTTTCTAGATACGTGGCTCTGAAAGTTCAAAAGAGCGCTCAGCATTACACGGAGGCTGCCATGGACGAGATAACCATTTTACAACAGATTGCAGATGGAGACCCAGAAGATAAGAAGTGTGTGGTGAAGCTTTTGGATCATTTCAAGCATTCAGGTCCCAATGGACAACATGTTTGTATGGTATTTGAATACCTTGGGGATAATCTTTTAACTCTTATCAAGTATACTGATTACCGAGGATTGCCAATGAACATGGTTAGAGAGATATGCTTTCATATTTTGGTTGGATTGGATTACTTACATAAGCAGCTTTCTATAATACATACTGACTTGAAGCCTGAGAACATCCTCTTGTTATCAATGATAGATCCATCCAAGGATCCTAGAAAGTCTGGTGCTCCCTTAATTCTACCAAATGCTAAAGATAAAACAGCACTTGAATCGGTGATTGGGAAAGAAATGAAAGCATTAAATGGGGATTTAATACAGAATCATAAGAAAAAGATTAAAAGAAAAGCTAAGAAGGCGGCTCAGGGATGTGTAGAGAAGGAAGCTTCTGAGGAAGTTGAGGGGGATCCTGAAACATCTGGTGCTGTAGAATCATCTGCCAATGCAATATTAAATGCAGGTTCCGCAGGAGAACAACCTTCTAGTCCTGCAGGCACCAAGAGGTTATCAGATGATGACGGGACCAAGGTAACCTGGTCAAAAAACCAGGGTAACAAAAGAGGAAGCCGTTCATTGAGGCAGAAGTTACTGAAATCGGTTGACCTTAACTGCAAATTAGTTGACTTTGGCAATGCTTGTTGGACATATAAGCAGTTTACAAATGATATTCAGACAAGACAATATAGGTGCCCAGAGGTGATCCTTGGATCAAAGTATTCTACGTCAGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGTGATGTACTATTTGATCCTCATAGTGGTGACAATTTTGATAGAGATGAGGATCACTTAGCACTAATGATGGAACTTCTGGGCATGATGCCTCGGAAGATTGCACTAGGGGGCCGTTACTCCCGAGATTTTTTCAATAGATATGGTGATCTGAGGCACATCCGTCGATTGCGATTTTGGCCCTTGAGCAAAGTTCTCTTGGAGAAATATGATTTCAATGAGCAAGATGCCAATGGCATGGCTGACTTTTTGGTTCCTATTCTCGACTTTGTTCCTGAGAAACGACCAACAGCTGGTCAGTGCCTTCTGCATCCATGGATGAATGCTGGTCCTTGCCTCTTGGAGCCGTCAGTGCCATCTTCTAATCACAATTCAGCTGCGGATGGTGCTGCTATTTCTGACCAAAAGAAGAAGGACAAGGACGAGAGAGAGGCCATGGAGGCGGGGATGGGAAATATTGCCATCAATTCAGACTCTAAACCGCACACAGATTTATTGGCGAAAGCCTGTCAAAGCAGTCAGAAGTAG 1662 0.4404 MGDKHEENRTESSDFTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQSKLGWGHFSTVWLAWDIQLSRYVALKVQKSAQHYTEAAMDEITILQQIADGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGLPMNMVREICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLILPNAKDKTALESVIGKEMKALNGDLIQNHKKKIKRKAKKAAQGCVEKEASEEVEGDPETSGAVESSANAILNAGSAGEQPSSPAGTKRLSDDDGTKVTWSKNQGNKRGSRSLRQKLLKSVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLSKVLLEKYDFNEQDANGMADFLVPILDFVPEKRPTAGQCLLHPWMNAGPCLLEPSVPSSNHNSAADGAAISDQKKKDKDEREAMEAGMGNIAINSDSKPHTDLLAKACQSSQK 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0551 553 ProSiteProfiles Protein kinase domain profile. 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0551 553 SMART serkin_6 44 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0551 553 MobiDBLite consensus disorder prediction 1 23 - -
Prci7g0551 553 FunFam CMGC/SRPK protein kinase 30 129 - -
Prci7g0551 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Prci7g0551 553 MobiDBLite consensus disorder prediction 510 525 - -
Prci7g0551 553 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 9 514 - -
Prci7g0551 553 MobiDBLite consensus disorder prediction 245 264 - -
Prci7g0551 553 FunFam Serine/threonine-protein kinase SRPK-like protein 315 485 - -
Prci7g0551 553 MobiDBLite consensus disorder prediction 274 311 - -
Prci7g0551 553 CDD STKc_SRPK 33 485 - -
Prci7g0551 553 ProSitePatterns Protein kinases ATP-binding region signature. 50 73 IPR017441 GO:0005524
Prci7g0551 553 Pfam Protein kinase domain 321 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0551 553 Pfam Protein kinase domain 44 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0551 553 MobiDBLite consensus disorder prediction 297 311 - -
Prci7g0551 553 MobiDBLite consensus disorder prediction 274 289 - -
Prci7g0551 553 SUPERFAMILY Protein kinase-like (PK-like) 39 497 IPR011009 -
Prci7g0551 553 Gene3D Transferase(Phosphotransferase) domain 1 98 185 - -
Prci7g0551 553 Gene3D Transferase(Phosphotransferase) domain 1 309 485 - -
Prci7g0551 553 MobiDBLite consensus disorder prediction 496 538 - -
Prci7g0551 553 Gene3D Phosphorylase Kinase; domain 1 30 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0551 Prci-Chr7 21583129 21587855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0551 1 538 EF-hand Containing Proteins AT5G22840 68.066 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Prci7g0551 Pkinase 4.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0551 K08832 - gmx:100803070 928.702