Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0541 ATGGCTCGATCTCTGTTATTATTATGCTTAAGTCTCTTTCTTCTCGCCTGTCTTGTTCCAACAGCAACATCAAGATCAAGAAGATCATCGAAACAATCTTTGTCCAGCAACATTCAATGGTGGTGCGATCGAACTCCACACCCAGAACAATGCAAATTCTACATGATGAGCCACAACCACCATGGTCAGAGGCTGAAGCACAAGTCCAAGTTCAGAGTCAAGCTGGTTCAGCTAGCTCTGGATCAAGCCAAGTACATGAAATATAATGCTCCTGGTGGCCGTGTCGGCTATGAAGAAAATGGCGACTCAGAGAAGCTGAAAGCTGTGTATGGTGATTGCTTCAAGCTCTACGATAACACCATCTTCTATTTGAACCAAACCCTCCTAGGGCTCAGATCAAAACGTCGTCGTGGTTGCTCCGCCATGGACGCTCAGACATGGCTGAGTGCTGCTCTCACCAACATACAAACTTGCAAGAATGGAGCTAAAGACTTAAAGCTCAGAGTGCCACAATTTACGGAGTCAAATACTGAGTGTTACAATGTCTCCAAGATGATAAGCAATAGCTTGGCGATAAACGCAGCGTTTCTGACAAGATCTGAGAAACGTGAGCTTTATAGTAATGCCATGGAGAACGAGGGGCATGGATTTCCCAGGTGGGTTTCAAGGAAGGAGAGGAAGCTGGTGACAGTGACGGCGGCGAAGATAAAGGCCAATCTGGTGGTGGCGAAGGACGGGACCGGGCATTTCAGGACGGTGCAGGCGGCGATAGACGCGGCGGCGAAGAGGAGGTACAAGACGAGGTTTGTGATAAGAGTGAAGAGAGGGGTTTATAAGGAGAATATTGAAGTTGACAAGACTAATGAAAATATAATGTTGATTGGTGATGGTATGAGACAAACTGTGATTACGGGTTCTAAGAGCGTTTCAGATGCTATTACCACCTATAGCAGTGCCACTGCCGGCATAGATGGCCCTCACTTCATTGCACGTGACATAACATTTCGAAACACAGCTGGCCCTCGCAAGGGACAAGCAGTGGCACTCCGATCATCCTCCGATCTCTCCGTCTTCTATCGATGCAGCATCGACGGTTATCAAGACACTGTCATGGCTCATGCACAACGTCAATTTTACAAAGGATGTTACATATACGGAACTGTGGATATCATCTTTGGCAACGCCGCCGTAGTTTTCCAAAACTGCGTAATTCAAGTAAGAAGGCCATTATCGGGCCAGGCCAATATGATCACGGCCCAAGGTCGGGGCGACCCGTTCCAAAATACCGGCACCTCAATACATAGTTGCATAATTAAAGCTGCAGCAGACCTCAAGCCCGTTGCGAGCTCTATCGCGACCTACCTAGGTCGGCCTTGGCAAGAATACTCTAGGGTTGTGGTGATGAGGTCCTACATAGACTCAATGGTGAGCCCATTGGGCTGGTCTACATGGGGAAATACCAATTTTGCCCTGAATACATTGTATTTTGGAGAGTATAAGAACTTTGGACCGGGTTCATCCACAAGAAATAGAGTAAAATGGAAAGGCTTTCATATCATAACTAGGGCAAGTGAAGCGTCTAGCTTCACTGTGAATGGTCTCATTGCTGGGAGTACATGGTTGCCATCAACTGGAGTTCCTTTTACTTCAGGTCTATAG 1659 0.4702 MARSLLLLCLSLFLLACLVPTATSRSRRSSKQSLSSNIQWWCDRTPHPEQCKFYMMSHNHHGQRLKHKSKFRVKLVQLALDQAKYMKYNAPGGRVGYEENGDSEKLKAVYGDCFKLYDNTIFYLNQTLLGLRSKRRRGCSAMDAQTWLSAALTNIQTCKNGAKDLKLRVPQFTESNTECYNVSKMISNSLAINAAFLTRSEKRELYSNAMENEGHGFPRWVSRKERKLVTVTAAKIKANLVVAKDGTGHFRTVQAAIDAAAKRRYKTRFVIRVKRGVYKENIEVDKTNENIMLIGDGMRQTVITGSKSVSDAITTYSSATAGIDGPHFIARDITFRNTAGPRKGQAVALRSSSDLSVFYRCSIDGYQDTVMAHAQRQFYKGCYIYGTVDIIFGNAAVVFQNCVIQVRRPLSGQANMITAQGRGDPFQNTGTSIHSCIIKAAADLKPVASSIATYLGRPWQEYSRVVVMRSYIDSMVSPLGWSTWGNTNFALNTLYFGEYKNFGPGSSTRNRVKWKGFHIITRASEASSFTVNGLIAGSTWLPSTGVPFTSGL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0541 552 Pfam Plant invertase/pectin methylesterase inhibitor 37 192 IPR006501 GO:0004857
Prci7g0541 552 NCBIfam pectinesterase inhibitor domain 1 193 IPR006501 GO:0004857
Prci7g0541 552 CDD PMEI-like_3 40 198 - -
Prci7g0541 552 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 196 IPR035513 -
Prci7g0541 552 Pfam Pectinesterase 239 537 IPR000070 GO:0030599|GO:0042545
Prci7g0541 552 Gene3D - 232 552 IPR012334 -
Prci7g0541 552 PANTHER PECTINESTERASE 17 542 - -
Prci7g0541 552 ProSitePatterns Pectinesterase signature 2. 384 393 IPR033131 -
Prci7g0541 552 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Prci7g0541 552 SMART PMEI_2 33 192 IPR006501 GO:0004857
Prci7g0541 552 SUPERFAMILY Pectin lyase-like 236 551 IPR011050 -
Prci7g0541 552 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 196 IPR035513 -
Prci7g0541 552 FunFam Pectinesterase 233 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0541 Prci-Chr7 21029610 21032757 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0541 35 552 Carbohydrate Esterase AT5G51500 57.390 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0541 K01051 - gmx:100807908 681.789