Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0540 ATGGCAAGTGAGAAAGAAGCATATTCGTCAAAGTCTTCTGACTCCAATTATACATTCCAAAACTGGAAGTACGATGCGTTCTTGAGTTTCAGGGGCAAAGATACTCGAAAAGGTTTTACGGATCACTTGTATTCTGCCCTACGTAAGAGTGGATTTGGAGTTTTTAGAGACAAGGAAGGATTCAAAAGGGGAGAAACTATCTCAGAAAAACTCAAAGAAACAATTGAACGATCTCGCTTTGCAATTGTTGTCGTGTCAAGAAATTATGCTTCCTCTTGGTGGTGTTTAGATGAGCTTCAACATATTCTTGCTACAAGAAATAAACCAAGTCAACAAGTTCTTCCCATCTTTTATCAAGTAAGTCCATCGGATGTAAGACATCAAGGAGGAAGCTTTGGTGAAGCTTTTGATGAGCTTCAAAAGAAGTTCCAAGATGACAAGGAGAAGATCAGAAAATGGAGAGATTCTCTTACCCAACTTGCTGATTTATCTGGTTGGGTTTCTGAGCAATGGTACGAATCACAACTTATTGAAAGTGTGGTTGAACAGTTATGGAACCACTTCCATGTTAACTTGCCACATACAATCAACGATGATAAGCTAATTGGTATTGACTGGAGAATTCGTGAAATAGAATTCTTTCTGTCAAAGAAGCTTGACGAAGTCAAGTTTGTAGGAATATGGGGTATGGGCGGGGTTGGCAAGACAACTCTTGCAGGAGCTATTTATGAGAAGTTGCACGATGAATTTGATTTTCATTGTTTTCTCGCCAATGTTAGGGAGGTTTCAGAAAGATTTGGGTTAGCTTCTTTGCAAAGAAAACTAGTTTCACATCTTAGAAAAGAAAACAAAGAAATTGAAGACATTTTCATAGTAAAGAATACAATAAAATACCATTTTCGCAATAAAAAGCTTTTGCTTATCCTTGATGATGTAAGTTCTATAGACCAATTGGAGAGCCTTGCTGGAAGCATGGAGTGGTTTGGTGCTGGGAGTAGAGTACTTATAACAACCAGAGATGTCCACTTACTTAGGTTACATCATGTGGATTCAATATACGAGGTTACGCCAATGAACAAGGATGAATCTCTTCAACTTTTTCACCTAAAAGCATTTACAAGAGATCAAGCCGATGACCAGGACCTTCTGGAGAAGTCTAAATTAGTCATTAGCTATGCAGAAGGCCTTCCTTTGGCTCTCTGTGTTTTGGGCTCCTTTTTTTGTGGAAGAAGTGCAGATGAATGGGAAAAGTCTCTGGATATGTTGAAGGAAGATTCAAATAATCAAATTTTTAAGATACTCAAAATAAGTTATGATGCATTAAGCCCTAAAGAAAAAGCAATATTTCTTGATATTGCTTGTTTTTTTAATATATGGGGAAAAGATGAAGTAACAGAAATATTGGAAAGTTCCGGTCTTCCGGCAACAATTGGTATCCCTAATCTTATCAAAAAATCTTTGCTTGATGAAGTTGAGGTTGGCTATAGCAAGTATATAAAGATGCACAATTTGATTCAAGATATGGGTAGGAGTATTGTTCGTGAAGAATCTCCTGTACATGTTGAAAGGCGCAGTAGATTGTGGTCTACCGAGGACATTGTGCAAGTACTAGAACGAGATTCGGGGACCGATGCAATAGAAGGTATAGTTTTGCCTTTTAGTTATGACAACGGCAGAACAGATTGGAATCCTAACGCCTTTTCAAACATGAGTCGGCTTCGAATACTCATCATATCATCAAGTATTAATGTCTGCCTTCCCTTTGGTCTGAAAGACTTACCTTGCAAATTAAAAGTTCTCGATTGGCATGAATGTCCTCTACAAACTCTTCCGTTGGATGAGGAAGTGCGTAAACTTGTACATCTCAGAATGAAAAATAGCAAAATAAAGCGACTTTGGCATGGTGGCAAACAGATGGAGAATCTCAAGTTTTTGGACTTGAGCCATTCCAAACAACTCACTGAAGCTCCACAATTCTCAAGATTTCAAAAACTAGAAAGATTAGTTCTTGAAGGATGTAAGGAACTTGTTCAAATTGATCCTTCTCTTGGCCAGCTCAAAAGTCTTGTTGAAGTCAATCTTAAAGATTGCAAAAATCTTAAAAGCCTTCCAAGAGAATTGGAAATGGCATCTCTGAGAGAATTTGTTCTTTGTGGCTGCACTAAAGTTAAGAAACTTCCAAATTTTGGAGAATGCATGAAAAATCTCTTAGTACTTGATGTTAAGGAGACAAATATAGCCGAACTTCCTGAGTCACTTGGATCACTAACTAATCTGGAAACTTTGGATTTAAGAGGTTGCCAAAATCTTGTTAGTCTACCCCATAACATCCAGAAATTGAAGTGTCTGAAAGTTCTTGATATTTCTAATTGCTCAAATTTATCAAAACTTCCAAAAAGCTTGAATGGAAATAAAGCCTTGGAAAAGCTTGATGCAAGTGGAACAACTATCACAGAAGTACCTTCTTCTATTGGTTCCTTAGAAAAACTCAAGATATTGTCACTTCATGGATTGAAAAAGCCAACATCCAAATCATGGATCAAGAGGTATTCATTTCCTAAGGGCTTAAAATTGCCTACATCAATCTTCAGCATTAAATCACTAGAAGAATTGGATCTAAGCCAGTGCAATATTCATGATGGATTCCTTCCGAATGATCTCAATGGCATGTCATCATTATGGAAATTAGATCTAAGTGGAAACAACTTCACGAATCTACCTACTGGTTGCATTTCTAAGCTCTTGAATCTACGATTTCTATACTTGAATTCCTGCCCAAGGCTTCAATTGTTGCCTAAGCCTTCACCAGGTTTAGATCTAATGGACGCTAGAGGTTGTACTTCATTGCCAACCTTGTCAGAAGAAAGATTATTACATCTCTTTGCTTCAATTGATCAGGGTGGACAATACGCGGAATGGAAGCCACATAGATTGAATGCTAACTCATGGGCATCACTATCAATTAAAACCTTCTCGGTGACTATCCCAGGAAGTGAAATACCGTTGTGGTTTCAGAGCCAAAAATCTATTTGCCAGGATAAGGAATATGAAAGTTCAATCATTGTGGACGTCCCACCTTCTGATTGGCTTGGATTTGCACTGTGTACTGTGCTTGAAAATGACATGTTTTATTCCACTACTGAAGCCGACCAAAATGTATTTTGTTGGCGTTATTACTTTGTTAAAGCTTCCTATGATAAGTTCGTGTTCTTACAAGGAAGGGATCGAAAACTGGAGAAGCCAATAAATTTTCCCCACCTTTGGATCTTGTTTGGACAGATTGGGAAGCAAACGTGCTCGAGTTTATCAATGGATTACAGCCGATTTCACTTGAAATTTGATGCTGAAAGGAAAGATGGACTCAATTATGTTAGGTGTGGGTGGCGTGTCATGAGCAAGATGGATTTTGAAAGCCTCCTCGTAGCAATGGAAGTGCACGAAAATCAAGAAAATGCATGGTGCCATGAAGCACAAGAGCAAGGACAACGCAACTTCTCAGATGGTGATCAGAGCTATCAAATTCAAACCTTAGCCGACAAAGGTAAAAAACCTGAGGCTCCAGAGTCATCTGCTCCTATGTTAGAAGATGAAGTCAGATTAAATGATTCATTGACTCCACATATTATGGACAATGCGAGTGATCGTGACTTTGCTCCACTAGCCGTGGTCCAGTCATTTGAGATTACTCAGGTAAGCACACACTGCTGTGAAGCTGAGGAACAAGGACAACAGAGTCTGTCACCAAGTGAGAACTTAAATGATTCACAAACACAGTTCATGGACGATGCAAGCCTAGCCATTGCAACGCCAACTAACGCCATCGATTCTCCTTCTCCGTCGAACAGCCTTCAACCCGGGCCATCATCTTAG 3870 0.3886 MASEKEAYSSKSSDSNYTFQNWKYDAFLSFRGKDTRKGFTDHLYSALRKSGFGVFRDKEGFKRGETISEKLKETIERSRFAIVVVSRNYASSWWCLDELQHILATRNKPSQQVLPIFYQVSPSDVRHQGGSFGEAFDELQKKFQDDKEKIRKWRDSLTQLADLSGWVSEQWYESQLIESVVEQLWNHFHVNLPHTINDDKLIGIDWRIREIEFFLSKKLDEVKFVGIWGMGGVGKTTLAGAIYEKLHDEFDFHCFLANVREVSERFGLASLQRKLVSHLRKENKEIEDIFIVKNTIKYHFRNKKLLLILDDVSSIDQLESLAGSMEWFGAGSRVLITTRDVHLLRLHHVDSIYEVTPMNKDESLQLFHLKAFTRDQADDQDLLEKSKLVISYAEGLPLALCVLGSFFCGRSADEWEKSLDMLKEDSNNQIFKILKISYDALSPKEKAIFLDIACFFNIWGKDEVTEILESSGLPATIGIPNLIKKSLLDEVEVGYSKYIKMHNLIQDMGRSIVREESPVHVERRSRLWSTEDIVQVLERDSGTDAIEGIVLPFSYDNGRTDWNPNAFSNMSRLRILIISSSINVCLPFGLKDLPCKLKVLDWHECPLQTLPLDEEVRKLVHLRMKNSKIKRLWHGGKQMENLKFLDLSHSKQLTEAPQFSRFQKLERLVLEGCKELVQIDPSLGQLKSLVEVNLKDCKNLKSLPRELEMASLREFVLCGCTKVKKLPNFGECMKNLLVLDVKETNIAELPESLGSLTNLETLDLRGCQNLVSLPHNIQKLKCLKVLDISNCSNLSKLPKSLNGNKALEKLDASGTTITEVPSSIGSLEKLKILSLHGLKKPTSKSWIKRYSFPKGLKLPTSIFSIKSLEELDLSQCNIHDGFLPNDLNGMSSLWKLDLSGNNFTNLPTGCISKLLNLRFLYLNSCPRLQLLPKPSPGLDLMDARGCTSLPTLSEERLLHLFASIDQGGQYAEWKPHRLNANSWASLSIKTFSVTIPGSEIPLWFQSQKSICQDKEYESSIIVDVPPSDWLGFALCTVLENDMFYSTTEADQNVFCWRYYFVKASYDKFVFLQGRDRKLEKPINFPHLWILFGQIGKQTCSSLSMDYSRFHLKFDAERKDGLNYVRCGWRVMSKMDFESLLVAMEVHENQENAWCHEAQEQGQRNFSDGDQSYQIQTLADKGKKPEAPESSAPMLEDEVRLNDSLTPHIMDNASDRDFAPLAVVQSFEITQVSTHCCEAEEQGQQSLSPSENLNDSQTQFMDDASLAIATPTNAIDSPSPSNSLQPGPSS 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0540 1289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 452 IPR027417 -
Prci7g0540 1289 MobiDBLite consensus disorder prediction 1239 1289 - -
Prci7g0540 1289 Pfam Leucine Rich Repeat 783 801 IPR001611 GO:0005515
Prci7g0540 1289 Pfam Leucine Rich Repeat 867 888 IPR001611 GO:0005515
Prci7g0540 1289 Pfam Leucine Rich Repeat 758 780 IPR001611 GO:0005515
Prci7g0540 1289 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 166 IPR035897 -
Prci7g0540 1289 Gene3D - 358 442 IPR042197 -
Prci7g0540 1289 SUPERFAMILY L domain-like 858 948 - -
Prci7g0540 1289 Gene3D - 191 352 IPR027417 -
Prci7g0540 1289 Gene3D Ribonuclease Inhibitor 553 728 IPR032675 -
Prci7g0540 1289 Gene3D Ribonuclease Inhibitor 854 960 IPR032675 -
Prci7g0540 1289 Gene3D Ribonuclease Inhibitor 729 853 IPR032675 -
Prci7g0540 1289 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Prci7g0540 1289 SUPERFAMILY L domain-like 500 838 - -
Prci7g0540 1289 SMART till_3 23 163 IPR000157 GO:0007165
Prci7g0540 1289 PRINTS Disease resistance protein signature 778 794 - -
Prci7g0540 1289 PRINTS Disease resistance protein signature 299 313 - -
Prci7g0540 1289 PRINTS Disease resistance protein signature 224 239 - -
Prci7g0540 1289 PRINTS Disease resistance protein signature 393 407 - -
Prci7g0540 1289 SMART LRR_typ_2 733 756 IPR003591 -
Prci7g0540 1289 SMART LRR_typ_2 780 804 IPR003591 -
Prci7g0540 1289 SMART LRR_typ_2 890 913 IPR003591 -
Prci7g0540 1289 MobiDBLite consensus disorder prediction 1239 1283 - -
Prci7g0540 1289 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 728 IPR044974 GO:0006952
Prci7g0540 1289 Gene3D - 18 190 IPR035897 -
Prci7g0540 1289 Pfam NB-ARC domain 211 439 IPR002182 GO:0043531
Prci7g0540 1289 Pfam TIR domain 23 201 IPR000157 GO:0007165
Prci7g0540 1289 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0540 Prci-Chr7 20994035 21003418 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0540 24 830 WRKY Transcription Factor Family AT4G12020 32.410 4.58e-103 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0540 - - pcin:129316410 1420.22