Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0539 ATGGACAGGGACGAATGTAAGGGGGACAACGGAGAATTCTATTTGCTGAAGAAGGTTGATGAAGTCAAGTTTGTAGGAATATGGGGTAAGGGCAGAGTTGGCAAGACAACTCTTTCAAGAGCCATTTGTGAGAAGTGCAATCATGAATGTGATTTTCATTGTTTTCTCCCCAGTGTTAGGGAGGATTCTGAAACATGTGGGCTATCTTCTTTACAAAGAAAAATACTTCCACATCTTAGAAAAGAAAACAAAGAAATTGAAGACACGTTCATAGTAAGGAAAACCATTAAAAACCATTTTCGCAATAAAAAGGTTTTGCTTATCCTTGATGACGTAAGTTCTATAAACCAATTGGAGAGCCTTGCTGGAAGCATGGAGTGGTTTGGTGCTGGGAGTAGAGTAATTATAACAACCAGAGATGTCAACTTACTTAGGTTACATCATGTGGATTCAATATACGAGGTTAATACAATGAACGAGGATGAATCTCTTCAACTTTTTCGCCTAAAAGCATTTACAAGAGATCAAGCTGCAGATGAACAGGGCCTTTTGGAGAAGTCTAAATAA 567 0.3827 MDRDECKGDNGEFYLLKKVDEVKFVGIWGKGRVGKTTLSRAICEKCNHECDFHCFLPSVREDSETCGLSSLQRKILPHLRKENKEIEDTFIVRKTIKNHFRNKKVLLILDDVSSINQLESLAGSMEWFGAGSRVIITTRDVNLLRLHHVDSIYEVNTMNEDESLQLFRLKAFTRDQAADEQGLLEKSK 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0539 188 Pfam NB-ARC domain 16 180 IPR002182 GO:0043531
Prci7g0539 188 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 176 IPR044974 GO:0006952
Prci7g0539 188 Gene3D - 11 152 IPR027417 -
Prci7g0539 188 PRINTS Disease resistance protein signature 24 39 - -
Prci7g0539 188 PRINTS Disease resistance protein signature 99 113 - -
Prci7g0539 188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 18 179 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0539 Prci-Chr7 20967812 20968585 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0539 17 187 WRKY Transcription Factor Family AT5G45050 38.596 2.36e-29 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0539 - - pcin:129316576 382.874