Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0534 ATGGATGAGAATGAATCTCTTCAACTTTTTCGCCTAAAAGCATTTACAAGAGATCAGGCTGCAGATGAACAGGGCCTTTTGGAGAAGTCTAAATTAGTCATTAATTATGCAGAAGGCCTTCCTTTGGCTCTCCGTATTTTGGGTTCCTTTTTTTGTGGAAGACATGTAGGTGAATGGGAAAAGGCTCTGGATATGTTGAAGGAAGATCCAAATAATCATGTTTTTAATATACTGAAAATAAGTTATGCTACATTAAACCCTGCAGAAAAGGCAATGTTTCTTGACATTGCTTGTTTTTTTAATATTTGGGGAAAATATGAAGTAATGCAAATTTTGGAAAGTTGTGGTCTTTATGCAACAATTGGTATCCCGAGTCTTATCAAAAAATCTTTGCTCGATGAAGTTGAGGTAGGCGATTACAAGTATATAAAGATGCACAATTTGATTCAAGATATGGTTAGGAGTATTGTTCGGGAAGAATCTCCTGGACAAGTTGAAAGGCGCAGCAGATTGTGGTATGCCAAGGACATTGTTCAAGGGACCGATGCAATAGAAGGTATAGTTTTCCCTTGTAGTTATGACAATGGCATAACTGAATGGAAACCTAACCCTAATGCCTTTTCAAACATGAGTCGCCTTCGAATACTCATCATATCATGTAATGTTTCCCTTCCTTTTGGTCTGAAAGACTTACCTTGCAAATTAAAAGTTCTTGATTGGTATGGATATCCTCAACAAACACTTTCATTGGATGCAAAATTGGATGAACTTATGGAGAATCTCAAGTTTTTGGACTTCAGCCATTCCAAACAACTCATTGAAGCTCGACATTTGTCCACATTTCCAAAACTAGAAAGATTAGTCCTTGAAGGATGCAAGGAACTTGTTCAAATTGATCTTTCTCTTGGCCAGCTCAAAGGCCTTGTTGAAGTCAATTTTAAAGATTGCAAAAATCTCAAAAGCCTTCCAAGAGAATTGGAAATGGCATCTCTGAGAGAATTTGTTCTTTGTGGCTGCACGAAAGTTAAGAAGCTTCCAAATTTTGGAGAATGTATGGAAAATCTCGTAGTACTTGATGTTAAGGAGACAAGCATAGCCGAACTTCCTGAGTCACTTGGATCACTAACTAATCTGGAAACTTTGGATTTAAGAGGTTGTCAAAATCTTGTTAACCTACCCCATAACATTCAGAAATTGAAGTGTCTGAAAGTTCTTGATATTTTTAGTTGTTCAAATTTATCTAAACTTCCAAAAAGCTTGAATGAAAATAAAGCCTTGGAAAAGCTTGATGCAAGTGGAACAACTATCACAGAAGTACCTTCTTCTGTTGGTTCCTTAGAAAAACTCAAGAAACTGTCACTTCATCCTAATAAGGGCTTAAAATTGCCTACATCAATCTTCAGCGTTAAGTCACTAGTAGAATTAGATCTAAGCCAGTGCAATATTGAAGATGGAATCCTTCCAAGTGACCTCAGTGGCTTGTCATCATTGTGGAAATTAGATCTAAGTGGAAACAACTTCACGAATCTACCTATTGATTGCATTTCTAAGCTCTTGAACCTACGATTTCTAATTTGA 1578 0.3669 MDENESLQLFRLKAFTRDQAADEQGLLEKSKLVINYAEGLPLALRILGSFFCGRHVGEWEKALDMLKEDPNNHVFNILKISYATLNPAEKAMFLDIACFFNIWGKYEVMQILESCGLYATIGIPSLIKKSLLDEVEVGDYKYIKMHNLIQDMVRSIVREESPGQVERRSRLWYAKDIVQGTDAIEGIVFPCSYDNGITEWKPNPNAFSNMSRLRILIISCNVSLPFGLKDLPCKLKVLDWYGYPQQTLSLDAKLDELMENLKFLDFSHSKQLIEARHLSTFPKLERLVLEGCKELVQIDLSLGQLKGLVEVNFKDCKNLKSLPRELEMASLREFVLCGCTKVKKLPNFGECMENLVVLDVKETSIAELPESLGSLTNLETLDLRGCQNLVNLPHNIQKLKCLKVLDIFSCSNLSKLPKSLNENKALEKLDASGTTITEVPSSVGSLEKLKKLSLHPNKGLKLPTSIFSVKSLVELDLSQCNIEDGILPSDLSGLSSLWKLDLSGNNFTNLPIDCISKLLNLRFLI 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0534 525 Pfam NB-ARC domain 2 81 IPR002182 GO:0043531
Prci7g0534 525 SUPERFAMILY L domain-like 144 524 - -
Prci7g0534 525 Gene3D Ribonuclease Inhibitor 191 350 IPR032675 -
Prci7g0534 525 Gene3D Ribonuclease Inhibitor 351 525 IPR032675 -
Prci7g0534 525 PRINTS Disease resistance protein signature 37 51 - -
Prci7g0534 525 PRINTS Disease resistance protein signature 373 389 - -
Prci7g0534 525 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 343 461 IPR044974 GO:0006952
Prci7g0534 525 Pfam Leucine rich repeat 448 507 IPR001611 GO:0005515
Prci7g0534 525 Pfam Leucine Rich Repeat 377 399 IPR001611 GO:0005515
Prci7g0534 525 SMART LRR_typ_2 352 375 IPR003591 -
Prci7g0534 525 SMART LRR_typ_2 494 517 IPR003591 -
Prci7g0534 525 Gene3D - 1 86 IPR042197 -
Prci7g0534 525 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 96 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0534 Prci-Chr7 20869745 20872053 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0534 33 452 WRKY Transcription Factor Family AT4G12020 35.000 2.38e-56 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0534 - - pcin:129316573 1046.57