Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0527 ATGTTTTTTTGCAGGCCACAAAGTATACTGTTGGTTCATCAAATTACATTCCAGTTAAATTTTTCGGGCCAAATTCTTCCAATGGCAAGTGGCCAAGAAGCACATTCCTCAAATTCTTCTAACTCCAATTCAGCCCAGAATTGCCGATTTAAAGTCTTTAGAGATGAGGAAGAGCTTGAGAGGGGAGAAATTATCTCGGAGAAACTCCTAAAAATCATTGAGCAATCTCGCTTTGCAATTGTTATTGTGTCCGAAAATTATGCCTCTTCTTCATGGTGCTTAGATGAGCTCCAACATATTATTTTTACCTCTAGATCAAATGAACTGCATCTGCGAGTTTTTCCCATCTTTCATCATGTAGATCCTTCTCAAGTAAGAAAGTTAGAAGGAAGTTTCGGTGAAGGTTTTGATAGCCTTAAAGAGAGGTTCGACAATGACAAGGTCGAAAAATGGAGAGATTCTCTAAAACAACTTGCTGCTTTAGCTGGTTGGGTATCCAAGGAGTGGTACGAATCAAGACTAGTTGATGATGTGGTTGAAAAGTTATCGGACAAAATTTATGGTAAGTTTCCACATACCAGCAGTGACAAACTAATTGGTATTGACAGGAGAATTCATGAAATAGAAGAATTACACTTGAAGAATTATAAGAACCTTGATGATGTTAAGTTTGTAGGAATTTGGGGTATGGGCGGAGTTGGCAAGACAGCTCTTGCAGGAGCTATTTATGAGAAATTGCATGACGAATTTGACTTTCATTGTTTTCTCGCCAATGTTAGGGAGGATTCAGAAAGATGTGGCCTGTTTAGCTTGCAAAAAAGATTGCATTCACTTCTCAGGGGAAAAAACAATGAAACCGAGGATACGTTCGTAGTAAGAAATATAATACAAGAACATTTCCGCGAGAGAAAGGTTATGCTTATCCTAGATGATGTAACTTCTAGCGAACAAATAACGGAGTTAGCTAGGCGAGAGTGGTTTGGTGCTGGGAGTAGGGTTATTATAACTACTAGAGACTTCCACTTACTTAGATCACATGATGTGGGCTCAATATATGAGGTTCAACCTATGAACGAGGATGAATCTCTTCGACTCTTTTGTCAAAAAGCATTTAGAAGAGATTACCCTGAAGAGGCTTTTTTGGAGAAGTCTAAATTAGCTATAAATTATGCAGAAGGCCTTCCTTTGGCTCTCCTTGCATTGGGTTCCTTCTTTTGTGGAAAAAGTGTAGATGAATGGGAAAGTGCTCTGGATATGTTGAAGGAAGATTCAAATAATCAAATTTTTCAGAAACTCAAAATAAGTTTTGATGCATTATGCCCTGCAGAAAAGGCAATATTTTTAGATATTGCATGTTTTTTTAATAAGTGGGGAATAAATGAAGTAAGGCAGATATTGAATAATTGTGGTCTTCACGCACCAATTGGAAGACTCGTTGAAAAATCTTTGGTAGCTGAAGTTGAGATTGGCAATGCCAAGTATATAAAGATGCATAGTTTGATTCAAGATATGGGTAGGAGTATTGTTTGGGAGGAATCTCCTAAAAAGGTTGAAGAGCGCAGCAGATTGTGGTGTGCCAAGGAAATTGATGAAGTACTAGCAAAAAATAAGGGAACTAATGTGACAGAAGGTGTGGTTTTGCCTTTCTTTGACGAAGATGAAACAGAGAGGAAGGAAGGCGTGGCTTTGCCAAGTAGCTTTGACAGAATTCAGAAACGGTGGATTCGAACGGCCTTTTCAAAAATGGGAAGCCTTCGATTACTCGTCATATCATGTAACGTTCACCTTCTCTCAGGTCTCAAAGACTTACCTCGCGAGTTGAAAGTTCTCGATTGGTATGAATATCCTCTAGAAAGTCTCCCGTCGGGTGCAAAACTAGATGAACTCATATACCTCAAACTGCAAAATACCAAAATAAAGCGACTGGGGCATGGTTGCAGTATGGATAACCTGAAGTTTTTGGACTTGAGCCATTCCAAACACCTCACTGGAACTCCAGATTTTTCAAAATTTCAAAAACTTCATAGATTAGTTCTTGAAGGATGCCAAAAGCTCGTTCGCATTCATCCTTCGCTTGGCCAGCTCCATAGTCTTGTTGAGATAAATTTTAGAGATTGCAAAAATCTTAAATACCTTCCAAGAGAGCTGAAAATAGCATCTCTGGAAGTATTTGTTCTTTGTGGCTGCACTAAAGTTAAAAAACTTCCAAATTTTGGGGAATGCATGGGAAATCTCAAAGTTCTTGATGTTAAGGAGACAGGTATAGCCAAACTTCCTGAGTCACTGGTATCCCTAATTAATCTAGAAACTTTGGATTTAAGGGGTTGCCAAAATCTTGTTGGCCTTCCCCATGACATTCACAAATTGAGGCGCCTGAAAGTTTTGGATATTTTTGGATGCTCAAAATTTTCTGAACTACCAAAAAACTTGGAAAAAAATGAAGCTTTAGAAAAGCTTGATGCAAGCAGAACAGCTATCATAGAAGGACCTCCTTCTATTGGTTATAGGACGTCATTTCATCAATGGAGAAGACCAAAATCCAAATCATTGATCACGCCGCGACCTACATTTATCTTTAGAATTAAATCACTTAGAGAATTAGATCTCAGCGGGTGCAATATTCCTGATGGATTCATTCTGGAAGATCTCGGTCACTTGTCATTGTTGAGGAAACTAGATCTAAGTGGCAACAAGTTTGAGAACCTACCGTATGGCTGCATGTCGAGTCTGTCGAATTTACAATTTCTATATTTGAATTCCTGCTCGATGCTTCTATCGTTGCCCAGACCTCCACCTAGTTTAGATCTAGTGGATGCGGGAGGTTGTACCTCATTGTCAACTTTGTCGGATGAAAGCTTATTGCATCTCTTGGATTCAGTGAATCAGAATGGACAATACGCGGAAAGCATATCACATAGTTTGGATGCTGACTCAAGGGCATCACTGTCAATTAAAACCTTTTCGGTCACTATTCCAGGGAGTGAAATACCATCTTGGTTTCAGAGCCAAAAATCCCTTCGCCTGAATGAGGAAGGTGAAAGGTCAATCATCGTTGACGTCCCTTCTTCTGATTGGCTTGGATTTGCATTATGCATTGTCCTAGAAAATGATATGTTTTATTCCACTGAAGCCTTCCAAAATGCATTTTGCTGGCGCTATTATTTTGCTAAAGCTTCCGATGATCAGTTCGTGTTCTTGCAAGAAAGAGATCGAAAACTGGAGAAGCCAATAAATTCTCCCCACCTTTGGATATTGTTTGTGAAGGTTGGGAAGCAAACTTGCTCGAGTTTATCAACGGATTATAGCCGGCTTCACTTGAAATTTGACGCTGAAATTGAAAGGAAAGATGAACTCAAAGTTTGGTGCGGGTGGCGGGTCATGAGCGAGACGGATTTTGAAAGGCTCCGCTTAGCAATGGAATTGCACGTCGACCATCAAGAAAACGCAAGCTGCTCTGAAGCTCAGGAGGGAGGACAACCTAGTTTGTCACCAAGTGATCAGAACTTAAATGATTCACGGGCACAATTCATCACTAACGATGCAAGCCTACTCAATGGAACGCCACCCGACACTATCGAGTCACCTTCTCCCTCGAACAGCCTTCAACGTGGGCCATCTGAGAGAGCGACTACTAGTCAGGAAGCAACAAATCCCACCGATGATTCAATTGAAGGTAAACAATTTCATATTTCTGTCCCAAAGCAGAATCTTTCGTGCGAGATAATTAATTCTGCTGAGGAAGATGAAGCTTCCCCGCCAGGCCCACCCGCCAAAAGATCATTCATCAGGAGATATATGATGAAATTTCCTAAGTGTCTGACTTGA 3825 0.4018 MFFCRPQSILLVHQITFQLNFSGQILPMASGQEAHSSNSSNSNSAQNCRFKVFRDEEELERGEIISEKLLKIIEQSRFAIVIVSENYASSSWCLDELQHIIFTSRSNELHLRVFPIFHHVDPSQVRKLEGSFGEGFDSLKERFDNDKVEKWRDSLKQLAALAGWVSKEWYESRLVDDVVEKLSDKIYGKFPHTSSDKLIGIDRRIHEIEELHLKNYKNLDDVKFVGIWGMGGVGKTALAGAIYEKLHDEFDFHCFLANVREDSERCGLFSLQKRLHSLLRGKNNETEDTFVVRNIIQEHFRERKVMLILDDVTSSEQITELARREWFGAGSRVIITTRDFHLLRSHDVGSIYEVQPMNEDESLRLFCQKAFRRDYPEEAFLEKSKLAINYAEGLPLALLALGSFFCGKSVDEWESALDMLKEDSNNQIFQKLKISFDALCPAEKAIFLDIACFFNKWGINEVRQILNNCGLHAPIGRLVEKSLVAEVEIGNAKYIKMHSLIQDMGRSIVWEESPKKVEERSRLWCAKEIDEVLAKNKGTNVTEGVVLPFFDEDETERKEGVALPSSFDRIQKRWIRTAFSKMGSLRLLVISCNVHLLSGLKDLPRELKVLDWYEYPLESLPSGAKLDELIYLKLQNTKIKRLGHGCSMDNLKFLDLSHSKHLTGTPDFSKFQKLHRLVLEGCQKLVRIHPSLGQLHSLVEINFRDCKNLKYLPRELKIASLEVFVLCGCTKVKKLPNFGECMGNLKVLDVKETGIAKLPESLVSLINLETLDLRGCQNLVGLPHDIHKLRRLKVLDIFGCSKFSELPKNLEKNEALEKLDASRTAIIEGPPSIGYRTSFHQWRRPKSKSLITPRPTFIFRIKSLRELDLSGCNIPDGFILEDLGHLSLLRKLDLSGNKFENLPYGCMSSLSNLQFLYLNSCSMLLSLPRPPPSLDLVDAGGCTSLSTLSDESLLHLLDSVNQNGQYAESISHSLDADSRASLSIKTFSVTIPGSEIPSWFQSQKSLRLNEEGERSIIVDVPSSDWLGFALCIVLENDMFYSTEAFQNAFCWRYYFAKASDDQFVFLQERDRKLEKPINSPHLWILFVKVGKQTCSSLSTDYSRLHLKFDAEIERKDELKVWCGWRVMSETDFERLRLAMELHVDHQENASCSEAQEGGQPSLSPSDQNLNDSRAQFITNDASLLNGTPPDTIESPSPSNSLQRGPSERATTSQEATNPTDDSIEGKQFHISVPKQNLSCEIINSAEEDEASPPGPPAKRSFIRRYMMKFPKCLT 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0527 1274 Pfam TIR domain 47 198 IPR000157 GO:0007165
Prci7g0527 1274 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 450 IPR027417 -
Prci7g0527 1274 MobiDBLite consensus disorder prediction 1150 1225 - -
Prci7g0527 1274 Pfam NB-ARC domain 220 426 IPR002182 GO:0043531
Prci7g0527 1274 Gene3D Ribonuclease Inhibitor 741 968 IPR032675 -
Prci7g0527 1274 Gene3D Ribonuclease Inhibitor 563 740 IPR032675 -
Prci7g0527 1274 Gene3D - 31 186 IPR035897 -
Prci7g0527 1274 SUPERFAMILY L domain-like 496 949 - -
Prci7g0527 1274 SUPERFAMILY Toll/Interleukin receptor TIR domain 47 164 IPR035897 -
Prci7g0527 1274 MobiDBLite consensus disorder prediction 1149 1225 - -
Prci7g0527 1274 Pfam Leucine Rich Repeat 767 789 IPR001611 GO:0005515
Prci7g0527 1274 Pfam Leucine Rich Repeat 863 884 IPR001611 GO:0005515
Prci7g0527 1274 PRINTS Disease resistance protein signature 299 313 - -
Prci7g0527 1274 PRINTS Disease resistance protein signature 224 239 - -
Prci7g0527 1274 PRINTS Disease resistance protein signature 391 405 - -
Prci7g0527 1274 PRINTS Disease resistance protein signature 763 779 - -
Prci7g0527 1274 Gene3D - 187 349 IPR027417 -
Prci7g0527 1274 Gene3D - 357 440 IPR042197 -
Prci7g0527 1274 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 736 IPR044974 GO:0006952
Prci7g0527 1274 ProSiteProfiles TIR domain profile. 13 186 IPR000157 GO:0007165
Prci7g0527 1274 SMART till_3 14 161 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0527 Prci-Chr7 20753299 20761804 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0527 61 841 WRKY Transcription Factor Family AT4G12020 30.483 5.07e-83 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0527 - - pcin:129316410 2493