Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0516 ATGTCGAGCAATTCGCTGCCGCCATCGCATCTCTCTAATACATCGCCGACGAACCCTACCGGCTATGATTCCACTTCGAAGATATCATCGCCGGCATCCTCCAGAGCCAAGCTCCAGAAAAGTCCTCCGATTCCGAATCGGTGGACTGCGATAGAGGATGAAGGCGAGCAAAGGAACGAGGAGGCGGTACGTAAACTAGAACAGGAGCGAACCGAAGAAGCTAATCCTACGATTTTGCTTGCATCCTCTTTAGGGCTCAATCACATTCGGACTCGCTCGGCTTCTTCGCCTCTTCGGTTTCCGTCCTTGGCTGGCGCGTCTCCCAGTTCGAGCAAGGATTGCATCGGAACTGAGGATCGAATTGTAGTTTCAACGGATTTGGGAAAGAGAATATATGGAACTCAAAGTAAATTATCGAGAGCTCCTTCCCATGCTGTTCCTCTCACGCAGGGTAACGATGACATATTTGCCAAAGAATTGCAGTCCCCGCGCGTTCAAGCAATACTGCGCGTCACAAGTGGACGCAAGAAGAAACCTATCGATTTCAAAAGCTACTCTCATGAGCTCAACTCAAGAGGAGTCAAAGCTTTCCCAGTTTGGAAACATCGTGTATTCGGGCATATCGAGGAGGTTGAGGTTGCAATCAGAACTAAGTTTGGAAAGCTGAAGGAAGAAGTAGATTCTGACCTAATTGCTTTTGCCGGAGATTTGGTGGGACTACTGGAAAAAACTTTGGGGTCTCATCCTGAATGTAGAGAGAGCTTGGAGGATCTGTTAATTGTTGCCCAACAATGTGCAATGATGTCGCCCAGCGAGTTTTGGATGAACTGCGAAGCCATTGTTCAGAATTTAGATGACAGGCGTCAAGAGTTACCGATGGGGATTCTCAAGCAAGCTCATACACGCCTACTGTTTATCCTCACTCGATGCACACGTCTCGTGCAGTTCAACAAAGAGAATGGCTATGAACAAGCCATTCTGGGTCTTCACCAACTCAGTGATCTTGGCATTTATAGAGAGCAAATTTTGCATGCTGTAGAACATAAATCCATTGGTGGAGGAAACGAGATGGCTGAGGAACAGCGAACCAAGTCTGCAGTTAAAGAACCAGACAGTCAGATAACTCAAATTCAAACTGATCGGAATGTGAATACTGCAACTGACACTTCCAGAAGTGGTGATTCAACTGGAAGCGGCTATAAGATTTCATCCTGGAAAAAGTTTCCTAGTCATATTGAGAAAAAGAGTGAATATAAAGGTCAGGATGCCGAAGATTTGCCGTCGAAGGAAGAACAGGATCAGGTTCATGTCAAGAAAGAAAATGTCGAAAACGTGGATACTGATTCATCCAATCCTGAACAGTCAGAACTATCCTCCAGAGCTCAAAAGGTACACTGGGGATTCTGGGGAGATCCCCACAATCTAACATATGAGAACTCAATGATCTGCAGAATATGTGAGGTTGAAATACCAATTGTGTATGTGGAGGAGCACTCTCAAATATGCACTATTGCCGATAGATGTGATTTAAAAGGTCTTAACGTGAATGAACGGCTTGAAAGATTTGCCGAAACTATTGAAAAGATAATCGAATCATGGACACCAAGAAGCACACCTAAAAGCACCCCAAAAAGTACCCCAAAAAGTACCGACGGTCCTGGAGAAAGCTTTGAGAATGCGAGAGTATCTACTTCAAGTTTGCATGATGAGTTCAATGATTTATCTCTCGTGAGAAACAGCTTATCTCGTCGAGGCTCAGAAGACATGCTTGATTCTGTTCCCGAAGCTGACAATACTTTTATTAAGGATGATCTGAACCTTTTGCCAAAGTGTCATATGTCTTCAGTCGGAAGCTTGACACCCAGATCACCATTATTAACCCCACGAACAAGTCAGATAGAAATGTTATTAAGTGGGCGAAGAACAATATTGGAACTAGAGAGTTATTTCCAGATTAACAAACTAGTGGAAATTGCTCGTTCTGTTGCAAATGTGAATGACTACAGATCTTTGAACTATGTAAGTCGTCGCGTAGAAGAACTTAATCTCACCATTCAGGACAGAAAGGTCGATGCTCTCATTGTTGAAACTTTTGGGCGACGCATAGAGACTCTCTTGTCGGAAAAATATTTATCTCTTTGCGATCAACTAGACAACGAAAAGGTAGACTCATCGAATGGCTTGGTTGAAGAAGAGAGTTCAGTGGAAGATGATACTATTCGAAGCCTTCGTGCTAGCCCAATTCACCATTGTTCTAGGGATCGAACCTCCATCGAAGACTTCGAAATAATAAAACCAATAAGCCGAGGTGCATTCGGACGAGTTTTCCTAGCCAGGAAAAGAGCAACCGGAGATTTGTTTGCCATAAAGGTTCTGAAAAAGGCTGATATGATCCGCAAAAATGCAGTTGAAAGTATTTTGGCTGAGCGAGACATCCTTATATCAGTTCGAAATCCCTTTGTGGTTCGATTTTTCTACTCTTTCACTTGTAGGGAAAATCTTTATTTGGTTATGGAATTTTTAAATGGTGGAGACCTTTACTCTCTATTGAGAAATCTAGGTTGTTTAGATGAAGATATGGCACGTGTATATATTGCCGAAGTTGTGCTTGCATTGGAGTATTTACATTCCTTACATGTAATTCATAGAGACTTGAAGCCTGATAACTTGTTGATTGGCCAAGATGGTCACATCAAGTTGACAGATTTTGGGCTCTCCAAGGTTGGTCTTATTCACAGCACGGATGACTTATCAACTTCATCATTTTCTACTGATGATCTTGTAGGAAATGATGAACCAAAAAAAGATCGTTCTTCAAAAGTCGAACAACGTCAAAAGCAGTCAGTTGTTGGCACCCCAGATTATTTGGCACCTGAAATACTTCTCGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCTGTGGGTATCATCCTTTATGAGCTCCTTGTGGGTATTCCACCATTTAATGCAGAACATCCGCACCAAATTTTTGACAAAATAATTAACAGAGACATACAGTGGCCAAATGTACCTGAGGAGATGAGCTATGAAGCATGTGATTTGATTGACAAATTACTCGCAGAAAATCCGGTCCAAAGATTGGGAGCAACAGGAGCTGGTGAGGTTAAAAGTCACCCTTTCTTTAAGGACATTAATTGGGATACCCTAGCAAGACAGAAGGCTGCGTTCATACCAGCAGCTGAAAATCATGACACAAGTTATTTCATGAGCCGCTACATTTGGAACCCAGAGGATGAACATCTTACTGGAGGTAGCGATTTTGATGACCTGACTGATTCTTGCTTCAGTGGTTCAGGCAGCGACTTTATAGATGAAGATGGGGATGAATGTGGTAGCTTAGCAGATTTTAGTGGACCACCTCCTGAAGTGCAGTACTCATTTAGTAATTTCTCTTTTAAGAACTTGTCTCAGTTAGCATCTATCAATTATGATTTGGTGATCAAGAATGCCAAAGAATCATCCGATGATTCCAAACCATCTGCTTCGTGA 3513 0.4284 MSSNSLPPSHLSNTSPTNPTGYDSTSKISSPASSRAKLQKSPPIPNRWTAIEDEGEQRNEEAVRKLEQERTEEANPTILLASSLGLNHIRTRSASSPLRFPSLAGASPSSSKDCIGTEDRIVVSTDLGKRIYGTQSKLSRAPSHAVPLTQGNDDIFAKELQSPRVQAILRVTSGRKKKPIDFKSYSHELNSRGVKAFPVWKHRVFGHIEEVEVAIRTKFGKLKEEVDSDLIAFAGDLVGLLEKTLGSHPECRESLEDLLIVAQQCAMMSPSEFWMNCEAIVQNLDDRRQELPMGILKQAHTRLLFILTRCTRLVQFNKENGYEQDXILGLHQLSDLGIYREQILHAVEHKSIGGGNEMAEEQRTKSAVKEPDSQITQIQTDRNVNTATDTSRSGDSTGSGYKISSWKKFPSHIEKKSEYKGQDAEDLPSKEEQDQVHVKXKENVENVDTDSSNPEQSELSSRAQKVHWGFWGDPHNLTYENSMICRICEVEIPIVYVEEHSQICTIADRCDLKGLNVNERLERFAETIEKIIESWTPRSTPKSTPKSTPKSTDGPGESFENARVSTSSLHDEFNDLSLVRNSLSRRGSEDMLDSVPEADNTFIKDDLNLLPKCHMSSVGSLTPRSPLLTPRTSQIEMLLSGRRTILELESYFQINKLVEIARSVANVNDYRSLNYVSRRVEELNLTIQDRKVDALIVETFGRRIETLLSEKYLSLCDQLDNEKVDSSNGLVEEESSVEDDTIRSLRASPIHHCSRDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLHVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSTSSFSTDDLVGNDEPKKDRSSKVEQRQKQSVVGTPDYLAPEILLGMGHGATADWWSVGIILYELLVGIPPFNAEHPHQIFDKIINRDIQWPNVPEEMSYEACDLIDKLLAENPVQRLGATGAGEVKSHPFFKDINWDTLARQKAAFIPAAENHDTSYFMSRYIWNPEDEHLTGGSDFDDLTDSCFSGSGSDFIDEDGDECGSLADFSGPPPEVQYSFSNFSFKNLSQLASINYDLVIKNAKESSDDSKPSAS 1172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0516 1172 SUPERFAMILY Protein kinase-like (PK-like) 760 1079 IPR011009 -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 369 401 - -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 414 461 - -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 414 448 - -
Prci7g0516 1172 SMART serkin_6 763 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0516 1172 ProSiteProfiles Protein kinase domain profile. 763 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0516 1172 Gene3D Phosphorylase Kinase; domain 1 761 1078 - -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 354 401 - -
Prci7g0516 1172 Pfam Protein kinase domain 763 1051 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0516 1172 FunFam probable serine/threonine protein kinase IREH1 761 850 - -
Prci7g0516 1172 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
Prci7g0516 1172 MobiDBLite consensus disorder prediction 51 70 - -
Prci7g0516 1172 ProSiteProfiles AGC-kinase C-terminal domain profile. 1052 1152 IPR000961 GO:0004674|GO:0005524|GO:0006468
Prci7g0516 1172 Coils Coil 52 72 - -
Prci7g0516 1172 Gene3D Transferase(Phosphotransferase) domain 1 847 1069 - -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 535 564 - -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 1 70 - -
Prci7g0516 1172 CDD STKc_MAST_like 769 1056 - -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 930 945 - -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 924 946 - -
Prci7g0516 1172 PANTHER SERINE/THREONINE-PROTEIN KINASE 462 1110 - -
Prci7g0516 1172 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0516 Prci-Chr7 20565549 20588038 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0516 38 1171 AGC Kinase Gene Family AT5G62310 61.499 0.0 1357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Prci7g0516 Pkinase 1.9e-64 CL0016