Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0494 ATGGATGCTAGTTCTAATGCTGCACGTTCTTACTCTTCATTGAACTCGAAAATCCCCCCATGGAAGTATCATGTTTTCTTGAGTTTCAGAGGAGATGACACCCGAAAAGGCTTCACAGCCCATTTACATGCCGCTCTTCAACAAAGAGGTATCATGACTTTCATAGATGACGAGCTTCAGAGAGGAGATGTTATTTCTATTCAACTCATTCGAGCAATTGAAGATTCTCTCATCTCTCTTGTTATTTTTTCCCAAAATTATGCTTATTCAAGTTGGTGTTTGGATGAACTCCAAAAGATTCTTGAGTCTACAAGATCTTTAAATAGAGAAGTTATCCCAGTGTTCTATAATGTTGATCCCTCTGATGTACGACATCAAAAAGGAGCCTTTGCTGATGCCTTTCAAAAACACAGTGAAAGATTTCATGATGATGAAGAGAAGGTGCAGAGATGGAGAGATTCCTTGAGAGAAGTTGCAAATATTTCTGGCCACCACTCTAAGGATCAGCTGGAAACAAAATTGATTGAAGAAATTGTCAGAGTTGTATGGACAAAACTACAGCCTCACATGTCATATTGCTACAAAACTGAATTTGTTGGAGTGGAGTCAAGGATTGAAGAAGCGAATGCAATTTTAAAGATCGGATTGAATGATGTTCGCTTTTTAGGAATTTGGGGTATGGGCGGTATTGGCAAGACATCTCTTGCAAGAGCTATCTATGAGATAAACTGCAATCATTTTGATCTTCATTACTTTTTTACTAATGTTAGGGATGTTTGCACAAAGGAAGGACCGGTTTCACTGCAAAGAAAATTTCTTTCACGTTATGGGAAGTTGAAAAGTATAGACATTGATGATGCATATGAAGGGATGAAGATCATGAGAAACATTCTTTGCACTCAAAAAGTGTTGTTGGTACTTGATGATGTCAGTGAAATTAGTCAACTTAAAGACCTTGCAGTGAAGCTAGCTTGGTTGGGTACAGGAAGTAGAGTAATAGTCACAACAAGGGATAGACATGTATTGATAGCACAAGGAGAATTTGAAATATATGAGGCAAAATTATTGAACCATAAGCAATCTCTTCAACTCTTTTGCCAATGGGCTTTTAAAAGTGATAAACCAACTGAGGAATATTTGGATTTGTCTAGAAGTGTGGTTAAACACGCTGCAGGGCTTCCTTTGACACTTAAAGTGTTGGGTAGTCAACTTTGTGGAACAAATATAGTAGAGTGGAAAGATACTTTGGAGAAAATAAAAAAAGTTCCACCGGGTGATGTTATAAATATACTTAGAGTAAGTTATGAAGCATTAGATGATATGGAGAAACAAATTTTCTTAGATATTGCATGTTTCTTCAAAGGAATGCATAAAGATGAAGTGATGCAAATATTAGAAATTTGTGATTTTCATCCAACAATTGGAATCAAAAGACTTGTTGAGAAATGTATGTTGGTAATTGAAAATCATCATGGACATGATATAGTGGGTATGCATGATATGTTACAAAAAATGGGGGAAAATATTATTTTGAAGGAATCACTAAAAGATGTTGGAAGACGTAGTAGGTTGTGGAAAACAGAGGACATTACTCATGTATTGACAAAAAATAAAGGCACTGATTTAATTGAGGTCATGTGTCTTCACCCCCCTATGCAATATGAAGAAAGTTGGATTCCTGAATCATTCTCAATGATGTGCAATCTTAGAATACTAATTATCAAATCATGTGATGTGTTCCTCCCCAGGGGACTTGAACATTTTCCTAGCTCATTGAAAATTCTTGAATGGGAGAAATATCCATTAAAATCCCTCCCACATGGTGTTCATCCACATGAACTTGTTCAAATAAAAATGCATCACAGTAAAATCACAAAACTTTGGCATCAAACCCAGATGTCAAAGAGGATAAAGATCATCGATTTGAGCCATTCTGAATATTTAATTCAAACTCCTGATTTTTCATTGCTACCAAATTTGGAGCAACTAGTTCTTAAAGGCTGCATGAAACTTGTTGAGATATGGCACCAGAAAGGCGTATGA 2043 0.3622 MDASSNAARSYSSLNSKIPPWKYHVFLSFRGDDTRKGFTAHLHAALQQRGIMTFIDDELQRGDVISIQLIRAIEDSLISLVIFSQNYAYSSWCLDELQKILESTRSLNREVIPVFYNVDPSDVRHQKGAFADAFQKHSERFHDDEEKVQRWRDSLREVANISGHHSKDQLETKLIEEIVRVVWTKLQPHMSYCYKTEFVGVESRIEEANAILKIGLNDVRFLGIWGMGGIGKTSLARAIYEINCNHFDLHYFFTNVRDVCTKEGPVSLQRKFLSRYGKLKSIDIDDAYEGMKIMRNILCTQKVLLVLDDVSEISQLKDLAVKLAWLGTGSRVIVTTRDRHVLIAQGEFEIYEAKLLNHKQSLQLFCQWAFKSDKPTEEYLDLSRSVVKHAAGLPLTLKVLGSQLCGTNIVEWKDTLEKIKKVPPGDVINILRVSYEALDDMEKQIFLDIACFFKGMHKDEVMQILEICDFHPTIGIKRLVEKCMLVIENHHGHDIVGMHDMLQKMGENIILKESLKDVGRRSRLWKTEDITHVLTKNKGTDLIEVMCLHPPMQYEESWIPESFSMMCNLRILIIKSCDVFLPRGLEHFPSSLKILEWEKYPLKSLPHGVHPHELVQIKMHHSKITKLWHQTQMSKRIKIIDLSHSEYLIQTPDFSLLPNLEQLVLKGCMKLVEIWHQKGV 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0494 680 SMART till_3 22 161 IPR000157 GO:0007165
Prci7g0494 680 Gene3D - 19 187 IPR035897 -
Prci7g0494 680 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Prci7g0494 680 Pfam NB-ARC domain 218 438 IPR002182 GO:0043531
Prci7g0494 680 PRINTS Disease resistance protein signature 221 236 - -
Prci7g0494 680 PRINTS Disease resistance protein signature 632 648 - -
Prci7g0494 680 PRINTS Disease resistance protein signature 390 404 - -
Prci7g0494 680 PRINTS Disease resistance protein signature 297 311 - -
Prci7g0494 680 Pfam TIR domain 22 198 IPR000157 GO:0007165
Prci7g0494 680 Gene3D Ribonuclease Inhibitor 553 678 IPR032675 -
Prci7g0494 680 SUPERFAMILY L domain-like 546 673 - -
Prci7g0494 680 Gene3D - 188 347 IPR027417 -
Prci7g0494 680 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Prci7g0494 680 ProSiteProfiles TIR domain profile. 21 186 IPR000157 GO:0007165
Prci7g0494 680 Gene3D - 355 439 IPR042197 -
Prci7g0494 680 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 672 IPR044974 GO:0006952
Prci7g0494 680 SUPERFAMILY "Winged helix" DNA-binding domain 426 534 IPR036390 -
Prci7g0494 680 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 163 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0494 Prci-Chr7 20480511 20489726 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0494 23 668 WRKY Transcription Factor Family AT4G12020 30.560 2.40e-82 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0494 - - pcin:129315690 1365.13