Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0493 ATGGATGCTAGTTCTAATGCTGCACGTTCTTACTCTTCATTGAACTCGAAAATCCCCCCATGGAAGTATCATGTTTTCTTGAGTTTCAGAGGAGATGACACCCGAAAAGGCTTCACAGCCCATTTACATGCCGCTCTTCAACAAAGAGGTATCATGACTTTCATAGATGACGAGCTTCAGAGAGGAGATGTTATTTCTATTCAACTCATTCGAGCAATTGAAGATTCTCTCATCTCTCTTGTTATTTTTTCCCAAAATTATGCTTATTCAAGTTGGTGTTTGGATGAACTCCAAAAGATTCTTGAGTCTACAAGATCTTTAAATAGAGAAGTTATCCCAGTGTTCTATAATGTTGATCCCTCTGATGTACGACATCAAAAAGGAGCCTTTGCTGATGCCTTTCAAAAACACAGTGAAAGATTTCATGATGATGAAGAGAAGGTGCAGAGATGGAGAGATTCCTTGAGAGAAGTTGCAAATATTTCTGGCCACCACTCTAAGGATCAGCTGGAAACAAAATTGATTGAAGAAATTGTCAGAGTTGTATGGACAAAACTACAGCCTCACATGTCATATTGCTACAAAACTGAATTTGTTGGAGTGGAGTCAAGGATTGAAGAAGCGAATGCAATTTTAAAGATCGGATTGAATGATGTTCGCTTTTTAGGAATTTGGGGTATGGGCGGTATTGGCAAGACATCTCTTGCAAGAGCTATCTATGAGATAAACTGCAATCATTTTGATCTTCATTACTTTTTTACTAATGTTAGGGATGTTTGCACAAAGGAAGGACCGGTTTCACTGCAAAGAAAATTTCTTTCACGTTATGGGAAGTTGAAAAGTATAGACATTGATGATGCATATGAAGGGATGAAGATCATGAGAAACATTCTTTGCACTCAAAAAGTGTTGTTGGTACTTGATGATGTCAGTGAAATTAGTCAACTTAAAGACCTTGCAGTGAAGCTAGCTTGGTTGGGTACAGGAAGTAGAGTAATAGTCACAACAAGGGATAGACATGTATTGATAGCACAAGGAGAATTTGAAATATATGAGGCAAAATTATTGAACCATAAGCAATCTCTTCAACTCTTTTGCCAATGGGCTTTTAAAAGTGATAAACCAACTGAGGAATATTTGGATTTGTCTAGAAGTGTGGTTAAACACGCTGCAGGGCTTCCTTTGACACTTAAAGTGTTGGGTAGTCAACTTTGTGGAACAAATATAGTAGAGTGGAAAGATACTTTGGAGAAAATAAAAAAAGTTCCACCGGGTGATGTTATAAATATACTTAGAGTAAGTTATGAAGCATTAGATGATATGGAGAAACAAATTTTCTTAGATATTGCATGTTTCTTCAAAGGAATGCATAAAGATGAAGTGATGCAAATATTAGAAATTTGTGATTTTCATCCAACAATTGGAATCAAAAGACTTGTTGAGAAATGTATGTTGGTAATTGAAAATCATCATGGACATGATATAGTGGGTATGCATGATATGTTACAAAAAATGGGGGAAAATATTATTTTGAAGGAATCACTAAAAGATGTTGGAAGACGTAGTAGGTTGTGGAAAACAGAGGACATTACTCATGTATTGACAAAAAATAAAGGCACTGATTTAATTGAGGTCATGTGTCTTCACCCCCCTATGCAATATGAAGAAAGTTGGATTCCTGAATCATTCTCAATGATGTGCAATCTTAGAATACTAATTATCAAATCATGTGATGTGTTCCTCCCCAGGGGACTTGAACATTTTCCTAGCTCATTGAAAATTCTTGAATGGGAGAAATATCCATTAAAATCCCTCCCACATGGTGTTCATCCACATGAACTTGTTCAAATAAAAATGCATCACAGTAAAATCACAAAACTTTGGCATCAAACCCAGATGTCAAAGAGGATAAAGATCATCGATTTGAGCCATTCTGAATATTTAATTCAAACTCCTGATTTTTCATTGCTACCAAATTTGGAGCAACTAGTTCTTAAAGGCTGCATGAAACTTGTTGAGGTGCATCCATCACTTGGACATCATAAGAAAATCATTTTAGTGAATTTGGAAGGTTGTAAAAATCTTAAAGCTCTTCCTTCTAAGCTGGAAATGGATTCTATAAAAGAATTGGTTCTCTCTGGTTGCTCCAATTTTAAAAAACTTCCTGAGTTTGGAGAAAACATGAAATACTTGTCAATACTGAAGTTGCAAGATTGCAAGAATTTATTGTGTCTTCCACGTACTATTGTTAACCTGAAATCTCTCAAAACTCTTAATATATCTGGTTGCTCAAAATTTACATCATTGTCGAAAAATTTGAATGAAATTGAGAGTATAGAGGATCTTAATGTGAGTGAATCTTCTCTAAAAGAAATACCATCATCCATTGTTGGTTTAAAAAGCTTGAAGAAACTAAATGCAGAGGGATGCAATGGAATTGCACTAGATTCTGTATGGAGCACACTTTTTCCAATTTTAAGGGTCCTTGGGTTCAATAATTGTAAAGCTCCTATGAGGTTGACATTGCCTCCTTCTATCTCTAGCTTATCCTCATTGACAGAATTAAGGTTAAGAAATTGCAATCTAAGTGTTGGATCAATTCCAAATGATCTTTGCTGTTTACCATCTTTGGAGATTCTTGATCTTAGTAGAAATGATTTTAGCAACCTACCTTCTGGAAGTTGCGTTCTTCCTCCTTCATTCTCAACCTTATCCCGCTTGAGAAAATTGAATTTGCAATATTGTAATCTTTGTGATGGTTCAATTCCTGAAGATCTTAGTCCTTTGTCATCCTTAGAAGTTTTAATTCTACGAGGAAACAATTTTACTAACCTACCAATTGCTTTCATCTCTAATCTCCCAGCTCTACAAGGTCTTTTGTTGGGTCATTGCAATAGGCTCTTATCACTACCAAATGTTCCTCCCAATATTCAACATATTAGTGCACCTTATTGTCATCCCTCAATGAGAATCTTATCATTTCCTCAAGTGCTATGGAGATATCTTTTATCATCTTATAACTATGATTTGGTACCAAATTATAGAAGGCCTTTCATTCTTGTTCCTGGGATTGAAATTCCACCATGGTTCCATAATCAAGACTTTGATTTTCTTGACAACCAAAAAAGTTGTGTCTCAATAAAAGTAGACACTTCTCATTTTTGTGGTTCAATTAAAGCTATAGAATATTTTTTTGTTTTGTGA 3204 0.3536 MDASSNAARSYSSLNSKIPPWKYHVFLSFRGDDTRKGFTAHLHAALQQRGIMTFIDDELQRGDVISIQLIRAIEDSLISLVIFSQNYAYSSWCLDELQKILESTRSLNREVIPVFYNVDPSDVRHQKGAFADAFQKHSERFHDDEEKVQRWRDSLREVANISGHHSKDQLETKLIEEIVRVVWTKLQPHMSYCYKTEFVGVESRIEEANAILKIGLNDVRFLGIWGMGGIGKTSLARAIYEINCNHFDLHYFFTNVRDVCTKEGPVSLQRKFLSRYGKLKSIDIDDAYEGMKIMRNILCTQKVLLVLDDVSEISQLKDLAVKLAWLGTGSRVIVTTRDRHVLIAQGEFEIYEAKLLNHKQSLQLFCQWAFKSDKPTEEYLDLSRSVVKHAAGLPLTLKVLGSQLCGTNIVEWKDTLEKIKKVPPGDVINILRVSYEALDDMEKQIFLDIACFFKGMHKDEVMQILEICDFHPTIGIKRLVEKCMLVIENHHGHDIVGMHDMLQKMGENIILKESLKDVGRRSRLWKTEDITHVLTKNKGTDLIEVMCLHPPMQYEESWIPESFSMMCNLRILIIKSCDVFLPRGLEHFPSSLKILEWEKYPLKSLPHGVHPHELVQIKMHHSKITKLWHQTQMSKRIKIIDLSHSEYLIQTPDFSLLPNLEQLVLKGCMKLVEVHPSLGHHKKIILVNLEGCKNLKALPSKLEMDSIKELVLSGCSNFKKLPEFGENMKYLSILKLQDCKNLLCLPRTIVNLKSLKTLNISGCSKFTSLSKNLNEIESIEDLNVSESSLKEIPSSIVGLKSLKKLNAEGCNGIALDSVWSTLFPILRVLGFNNCKAPMRLTLPPSISSLSSLTELRLRNCNLSVGSIPNDLCCLPSLEILDLSRNDFSNLPSGSCVLPPSFSTLSRLRKLNLQYCNLCDGSIPEDLSPLSSLEVLILRGNNFTNLPIAFISNLPALQGLLLGHCNRLLSLPNVPPNIQHISAPYCHPSMRILSFPQVLWRYLLSSYNYDLVPNYRRPFILVPGIEIPPWFHNQDFDFLDNQKSCVSIKVDTSHFCGSIKAIEYFFVL 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0493 1067 SMART till_3 22 161 IPR000157 GO:0007165
Prci7g0493 1067 SUPERFAMILY "Winged helix" DNA-binding domain 426 534 IPR036390 -
Prci7g0493 1067 PRINTS Disease resistance protein signature 221 236 - -
Prci7g0493 1067 PRINTS Disease resistance protein signature 390 404 - -
Prci7g0493 1067 PRINTS Disease resistance protein signature 750 766 - -
Prci7g0493 1067 PRINTS Disease resistance protein signature 297 311 - -
Prci7g0493 1067 ProSiteProfiles Leucine-rich repeat profile. 876 897 IPR001611 GO:0005515
Prci7g0493 1067 SUPERFAMILY L domain-like 556 892 - -
Prci7g0493 1067 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Prci7g0493 1067 Gene3D Ribonuclease Inhibitor 704 774 IPR032675 -
Prci7g0493 1067 Gene3D Ribonuclease Inhibitor 553 703 IPR032675 -
Prci7g0493 1067 Gene3D Ribonuclease Inhibitor 896 1005 IPR032675 -
Prci7g0493 1067 Gene3D - 192 347 IPR027417 -
Prci7g0493 1067 SUPERFAMILY L domain-like 843 985 - -
Prci7g0493 1067 SMART LRR_typ_2 874 897 IPR003591 -
Prci7g0493 1067 SMART LRR_typ_2 929 952 IPR003591 -
Prci7g0493 1067 SMART LRR_typ_2 849 873 IPR003591 -
Prci7g0493 1067 SMART LRR_typ_2 904 928 IPR003591 -
Prci7g0493 1067 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 163 IPR035897 -
Prci7g0493 1067 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 449 IPR027417 -
Prci7g0493 1067 Gene3D - 19 191 IPR035897 -
Prci7g0493 1067 ProSiteProfiles TIR domain profile. 21 186 IPR000157 GO:0007165
Prci7g0493 1067 Gene3D - 355 439 IPR042197 -
Prci7g0493 1067 Gene3D Ribonuclease Inhibitor 775 895 IPR032675 -
Prci7g0493 1067 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 23 723 IPR044974 GO:0006952
Prci7g0493 1067 Pfam NB-ARC domain 218 438 IPR002182 GO:0043531
Prci7g0493 1067 Pfam TIR domain 22 198 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0493 Prci-Chr7 20480511 20489730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0493 23 805 WRKY Transcription Factor Family AT4G12020 30.685 2.33e-101 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0493 - - pcin:129315690 2144.01