Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0470 ATGGATCCTCATGATGTTGAAGTTAGATTCCGTTGTTTAGTTTCGACACGAGAAACAATTAGTACTTGTTTTGATCCCTATAATCAGAGTCTCATTGATCATCCTAGCAATGATCAATATTTCAGTTCACAGAACCATGCAGCAACCAAGATCTTGGATTTCGCAAGAAACATGACTGGTAATACACACAGGGACAAAAAGTACTTGTGCTTGAGAGTGGATCTTCATGTTGCCTGTATCATGAGCTGGTATGATCATGTTTTGTTCGTTCCTGCGAGTAAATCGTCCATTGAATGTTTGGAGAAAGTGAGGATTGATGAAGAGATCAATGAAAGGTTGAGTAATAATAATTGCTTGATTTGCTTAGAAGGTTTTGAAGTTGATGAAGAAGCTGTTCGTATAGCTTGTTCGCATTTGTTTCACAGAATTTGTATTGTTAATTGGTTGCAGCGAAAGCATGTTTGTCCTTTGTGTCGTTTTCAATTGCCTATAAATGATGATTAA 504 0.369 MDPHDVEVRFRCLVSTRETISTCFDPYNQSLIDHPSNDQYFSSQNHAATKILDFARNMTGNTHRDKKYLCLRVDLHVACIMSWYDHVLFVPASKSSIECLEKVRIDEEINERLSNNNCLICLEGFEVDEEAVRIACSHLFHRICIVNWLQRKHVCPLCRFQLPINDD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0470 167 ProSiteProfiles Zinc finger RING-type profile. 118 159 IPR001841 -
Prci7g0470 167 SUPERFAMILY RING/U-box 117 164 - -
Prci7g0470 167 Pfam Ring finger domain 116 159 IPR001841 -
Prci7g0470 167 SMART ring_2 118 158 IPR001841 -
Prci7g0470 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 165 IPR013083 -
Prci7g0470 167 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 50 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0470 Prci-Chr7 20089695 20090338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0470 91 162 C3H Transcription Factor Family AT1G68180 44.444 5.26e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0470 - - pcin:129316561 356.681