Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0469 ATGAGTACTTCTTTTGATCCCTACAATCAGAGTGTCGTTATTGATCATCCTACCGATGATCAATATTTCAATGTTTCAGTTCAGAGAAGCAACTGGGTATTCCAGAGAAGAACCTGTGTTCATGCATGTTCCTCTGGATTTGATTTCTTCAACATTTCCAAGAGCTCCATAGAAAAAGAAATAGACTCTATACTTTCTAGTTTTGATATTCATGGAAACTTTCGCAGCCAAGCAGCGACAAAAATCTTGGATTTTGCAAGAAACATGATTGATAATACACACAGAAACAAAAAGTACTTGTACTTGAGAGTTGATCTTCATGTCGCTCATATCATCTGGTATGATAATGATCATGAACATGAACATGAACATGATGACGATGTCGATGTCGATGACGACGATGACGACGACGATGATCATGTTTTGTTGGATCCCGCGAGTAAATCGTCCATTGAAGGTCTGGAGAAAGTGAAGATTGATGAAGAGATCAATGAAAGGTTAAGTAATAATGATTGTTCGATTTGCTTAGAAGGTTTCGAAGTTGATGAAGAAGCTGTTCTTATGCCTTGTTCTCATTTGTTTCATAAAATTTGTATTGTTAATTGGCTACAGCGAAAGCATTTTTGTCCTTTGTGTCGTTTTCAATTGCCTACTAGCGATGATGATTAA 669 0.3677 MSTSFDPYNQSVVIDHPTDDQYFNVSVQRSNWVFQRRTCVHACSSGFDFFNISKSSIEKEIDSILSSFDIHGNFRSQAATKILDFARNMIDNTHRNKKYLYLRVDLHVAHIIWYDNDHEHEHEHDDDVDVDDDDDDDDDHVLLDPASKSSIEGLEKVKIDEEINERLSNNDCSICLEGFEVDEEAVLMPCSHLFHKICIVNWLQRKHFCPLCRFQLPTSDDD 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0469 222 FunFam E3 ubiquitin-protein ligase RNF181 134 219 - -
Prci7g0469 222 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 97 217 - -
Prci7g0469 222 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 131 219 IPR013083 -
Prci7g0469 222 ProSiteProfiles Zinc finger RING-type profile. 172 213 IPR001841 -
Prci7g0469 222 SMART ring_2 172 212 IPR001841 -
Prci7g0469 222 CDD RING-H2_PA-TM-RING 171 213 - -
Prci7g0469 222 Pfam Ring finger domain 170 213 IPR001841 -
Prci7g0469 222 SUPERFAMILY RING/U-box 171 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0469 Prci-Chr7 20080009 20080677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0469 135 222 C3H Transcription Factor Family AT5G01980 40.909 1.40e-15 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0469 - K11982 pcin:129316560 410.223