Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0411 ATGTCTCAAGACAGTTCAGACCCTTCTTCGGCTTGCTGCTCAAGATCGGATCATTTGGATTCGGCTTCAGCTGAACTCAAGCTTTACCGAGCCTTCATTTTCTCTGTACCCATCTTCTTCACTTTCATCCTCCTCTTTCTGTTCTACGTGTTTTACCTTCGACCTCGAAGGGTTGATTGGTCGTCTCTTAGGATGAGAGCTTTTGCGGCTGCGGAGGATAATGGCGGTAACTCCAGGCCTGAATTGGGCTTGAAGAAAGAGCTGAGAGAGATGCTACCGATTATCGTATACAAAGAAAGCTTCTCGGTTAAGGATACACAATGCTCAGTTTGCCTTTTGGACTACCAACCAGAGGATAAGCTTCAACAGATACCTGCATGCGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTCACTAACCACAGCACCTGCCCTCTATGCCGCTTGTCTCTTCTAGCTTCTGCTAAATCTTCAACTGAGACATCTAATTTACAGAGGCCGTCTGGCAATGAAGAAACACCAACTGCTCAATTCTCTGAATCAAGATCTACAACGCATCCAGATAATAGTGTAGCTGTGTAG 588 0.4575 MSQDSSDPSSACCSRSDHLDSASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRAFAAAEDNGGNSRPELGLKKELREMLPIIVYKESFSVKDTQCSVCLLDYQPEDKLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSTETSNLQRPSGNEETPTAQFSESRSTTHPDNSVAV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0411 195 PANTHER OS11G0150450 PROTEIN 40 170 - -
Prci7g0411 195 SMART ring_2 108 149 IPR001841 -
Prci7g0411 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 155 IPR013083 -
Prci7g0411 195 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Prci7g0411 195 MobiDBLite consensus disorder prediction 161 195 - -
Prci7g0411 195 CDD RING-H2_EL5-like 107 150 - -
Prci7g0411 195 Pfam Ring finger domain 107 150 IPR001841 -
Prci7g0411 195 FunFam RING-H2 finger protein ATL7 74 155 - -
Prci7g0411 195 SUPERFAMILY RING/U-box 92 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0411 Prci-Chr7 19063975 19069523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0411 21 191 C3H Transcription Factor Family AT4G10150 55.495 3.30e-66 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0411 K19039 - qsa:O6P43_001690 252.292