Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0392 ATGACTCCGGCGAATTTGGCAGGCCAGTTTGGTGACACGACATACACCAAAGTGTTTGTAGGAGGGTTGGCTTGGGAGACTCAGAAGGAAACCATGAAGAAATATTTCGAACAGTTTGGTGAGATCTTGGAAGCTGTCGTCATCACTGACAAAGCCACTGGCAAATCTAAAGGCTATGGATTCGTAACTTTTCGAGAACCAGAAGCCGCCATGAGAGCTTGTGTGGATGCTGCTCCTGTGATAGATGGGAGGAGGGCTAACTGCAACCTTGCTTCTTTGGGTGTCCAGAGATCCAAGCCTTCAACCCCAAAGCATGGAGGAGGAGGCAGGAACTTTAGGGTGATGGGTTCGTTTCAGACAGGGTTTGGAGGAGTAGGATCAACTTTTCCTTCTGCAGCAGCAGCAACACTTCCTCATTATGCTCTCCAGCAAGGAACACCTTATAATGTTTATGGGTACTCCCCATATTCGCCGGACTACACTTACCCTACGGGTTACTATAGTGTGTATGGAGGAGCAACTCAGTACCCACTGTATGGAACCGGACCAGGAGGTATGATGACCAGTGGTGCGGCCGCCGCCGCAGCCATCTACCCATATCTCCAGTTCGGAGAAGGGAGCGGCAGCGGCGCCTTAACCGGAGGCTACACTTCCGGCCAGGGCTACGGGGTTTACTACCCACCACAGCTCTTTCAGTACTCTCCCACCATTACTTCATCTGCTGGGTATGCCCAGCACTATGGTCCACCTATGTCTCTTGCTCCTTCGCCTGCTTTGCAATCAGTGTGTTTTGCTGTGCCGCAGGCGTGA 810 0.5185 MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGKSKGYGFVTFREPEAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHGGGGRNFRVMGSFQTGFGGVGSTFPSAAAATLPHYALQQGTPYNVYGYSPYSPDYTYPTGYYSVYGGATQYPLYGTGPGGMMTSGAAAAAAIYPYLQFGEGSGSGALTGGYTSGQGYGVYYPPQLFQYSPTITSSAGYAQHYGPPMSLAPSPALQSVCFAVPQA 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0392 269 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 73 IPR000504 GO:0003723
Prci7g0392 269 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 100 IPR000504 GO:0003723
Prci7g0392 269 SUPERFAMILY RNA-binding domain, RBD 12 112 IPR035979 GO:0003676
Prci7g0392 269 SMART rrm1_1 17 89 IPR000504 GO:0003723
Prci7g0392 269 CDD RRM_RBM24_RBM38_like 16 91 - -
Prci7g0392 269 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 10 97 - -
Prci7g0392 269 Gene3D - 4 112 IPR012677 -
Prci7g0392 269 PANTHER BOULE-RELATED 4 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0392 Prci-Chr7 18842816 18851406 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0392 1 189 C2H2 Transcription Factor Family AT2G19380 28.365 1.51e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0392 - - gmx:100781647 423.32