Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0384 ATGGAACCCTCCAGGTCTCATAATTCATCGTTCGCTCCAAAAAGTACTTTGATCCGAGATTCATCGTCGCCATTGTCAATCCCAGAAGAGAGATCTCAAGTTCAATGGACCTGGGAAGAGAACAAGGTATTTGAGAATACTTTAGCTGAGTTTGGTCTTGAATCTGAACTGCTACTTCCAACTCTTGCTTTGAGGATCCCCACAAAAAGCATCAATCAGTTTAAAGAGCATCTGAAAGCTCTGGAAGATGACATTAAGATGATTGAATGTTCAGATTTTGATGAAATTATGAACCTTGGAAAGATTGACGAACAAGCTCCTAAACAATCAAATGCAAGATCTATTCCTAGGGAACGTAGAAAAGGAATTCCATGGACCAAGACTGAACATGAAATGTTCCTTCAGGGGCTTGAGCGCTTTGGAAGAGGTGATTGGAAGAGCATATCAAGGTTTTTAGTGACATCTAAAACTCCAACTCAAGTGGCCAGTCATGCACAAAAGTACTTTAAGAAACTTGAAAACCCTAAGTCTCGTTCTAGGAAAGACGGATCGTTCATGCGAACGGTTGACGATTCACATATGCTGGCGGTGGCCATGGCAGAAAAGGCACAACTTGCCATCTCTGATGACTATAAGAAGCCATGA 645 0.4171 MEPSRSHNSSFAPKSTLIRDSSSPLSIPEERSQVQWTWEENKVFENTLAEFGLESELLLPTLALRIPTKSINQFKEHLKALEDDIKMIECSDFDEIMNLGKIDEQAPKQSNARSIPRERRKGIPWTKTEHEMFLQGLERFGRGDWKSISRFLVTSKTPTQVASHAQKYFKKLENPKSRSRKDGSFMRTVDDSHMLAVAMAEKAQLAISDDYKKP 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0384 214 SUPERFAMILY Homeodomain-like 119 174 IPR009057 -
Prci7g0384 214 ProSiteProfiles SANT domain profile. 125 174 IPR017884 -
Prci7g0384 214 FunFam transcription factor MYB1R1 123 174 - -
Prci7g0384 214 Gene3D - 123 174 - -
Prci7g0384 214 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 31 180 IPR043363 -
Prci7g0384 214 Coils Coil 71 91 - -
Prci7g0384 214 SMART sant 32 84 IPR001005 -
Prci7g0384 214 SMART sant 121 171 IPR001005 -
Prci7g0384 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 117 173 IPR017930 -
Prci7g0384 214 MobiDBLite consensus disorder prediction 1 33 - -
Prci7g0384 214 Pfam Myb-like DNA-binding domain 124 169 IPR001005 -
Prci7g0384 214 CDD SANT 124 169 IPR001005 -
Prci7g0384 214 Gene3D - 28 94 - -
Prci7g0384 214 NCBIfam myb-like DNA-binding domain, SHAQKYF class 121 171 IPR006447 GO:0003677
Prci7g0384 214 ProSiteProfiles Myb-like domain profile. 117 169 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0384 Prci-Chr7 18651501 18654387 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Prci7g0384 Myb_DNA-binding 1.7e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0384 - - pcin:129316546 420.239