Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0377 ATGGAAACGTTGCTTGACAATGCAACTAACTCGACAAGGGAAAATGAGAAGAACTCGAGCACGTCAGTCTTCCAAAAGATTGCAACATTTGAGGAGGAGTTGAAGGCTGTGCTGCCAAAGGAGGTTGAAAGTGCGAGAATTGCATACGAGGACGGCAACTCATCAGTTTCAAACAAAATCAAGGAATGCAGGTCCTACCCATTGTACAAGTTCGTGAGAGAGGATTTAGGAACTGGGCTGCTTACTGGAGAGAAGACGGGGTCACCAGGTGAAGAGTGTGACAAAGTCTTCACGGCTTTGTGCCAGGGCAAGATCATCGATCCTCTTCTGGAATGCCTTGGGCAGTGGAATGGAGCTCCTCTTCCTATCTGTTAG 375 0.4773 METLLDNATNSTRENEKNSSTSVFQKIATFEEELKAVLPKEVESARIAYEDGNSSVSNKIKECRSYPLYKFVREDLGTGLLTGEKTGSPGEECDKVFTALCQGKIIDPLLECLGQWNGAPLPIC 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0377 124 Gene3D - 1 49 IPR023144 -
Prci7g0377 124 SUPERFAMILY L-aspartase-like 5 124 IPR008948 GO:0003824
Prci7g0377 124 Gene3D Fumarase/aspartase (Central domain) 50 124 - -
Prci7g0377 124 MobiDBLite consensus disorder prediction 1 22 - -
Prci7g0377 124 PANTHER HISTIDINE AMMONIA-LYASE 4 124 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0377 Prci-Chr7 18445223 18445984 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0377 14 124 Monolignol Biosynthesis Gene Families AT2G37040 73.874 1.35e-57 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0377 K10775 - pop:18100180 192.586