Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0373 ATGGTGGTGAATGAAAGGCCGTCGAAGAGGATGAAGAGGAGAGTATCAGCCGATCTTTACGATTTTCTCACTTTTCCGGCCGCCGGTGACCGCTGCTGCGACGATGTAGTCGGCGGCGGTCAGCCGTTTCGGAAAGCCGTTCAGCGGTTTCTTACTAATTATGCGATGGTCACGTATCCCCCGTCGTTGTTTTCGTCGTTGATGACGTGGCAGATTTTGTTTCGGATCGGAGGACTCGTCGATGGGTCCGATCTGTCGCCGGCGATTGTCACCCTTGACATTGTGGAGGAAGACGTAACTCGATCTCGATCCTCAGTCTACTGTGATCAGTGCCGAGTTGTTGGATGGAGCGGCCATCCGGTATGCCGAAAGCGATATCACGTCATTATCCGAGCATCAAGTAATCGCATGGATGCATATGAAAGACCTTGTTCGTTATGTGGGAAATCTACCCAACTTTCGGAACCAAGGTGTAAATGGTGCGACACTGTCATCACTGTTGATGATCTTGAGGATTGGGTGTATAGTCAAATTGAAGATAACACTCATGTTCTGCACGGGATTGTCCATTCCAATGGTTATGGCCATTTGATGACTCTTAATGGAAGAGAGGGTGGTTCAAGCCTTCTCTCTGGTTCTGACATAATGGGTTTCTGGGACAGGCTTTGTGTTGCACTTGCTGTTAGGAAGGTTAGTGTGATGGATTTGTCGAAGAAGTTTGGGATGGAATACCGATTGCTTCATGCAATCACCAATGGCTGTTCTTGGTATGGGAATTGGGGTTATGAATTTGGGACTGGTAGCTATGCTCTCACTCAAGACTCGTACCAAAAAGCAGTGAATACCCTGTCAAGCATGCCCCTATCGGATTTATTATTCCAGGATCGTGGTCCCCGAAGCCGCCTGCAGTGTGTTATTTCTCTTTACCAGTCTTTGGCGGATACTGAACTGTTAACTATCAAAGATCTATTCTCCTTTTTGGCGAGCTTAATTCGTGAGTTCCACAAGCCTTTGACCACAAGAACATCGGATGCTGAAACTTGCAATGTGTTGTGTGCCTGGACAAGCAATGATGTTGAAGCTGTGCAACAGGCTTTGATCAAGGTACTGCTTGCATCGGCTACCTCTAGTGGGGCCAAATGGGTTACAAGACGAGCTCTCAAGGGTGCATTAAGTAGGGGTGTTGCATCTCCAGAGCTTCTAGATTACAGTCTGAAACATCTAGGGGGAAAGTTAGCTGCCTTCGGTATGGTAGTTAAGTCAAGATGCAATCCCGCATCTAGTGCTGTGGAGTTCAGGCTTGAACCCTTGAATGTCATGGAAAATGAAGTTAATGCAAATTCAGGTTACCCATCAAAAGAACAAGTGATTGCCGATTTGAAATTCCTGTTTGATTCCATTATTCATCCTGAAAGGATGGTGAGCTACAAACCTAAAATTATGAGGAAGCGGGTGGCTGATTCGGCCAGGAAGCTCCTCGACTGCAAGCAGTTCATGAAGGATTACAAGCCTGATAAGATGGTCGGTGAACAAACGCCTCCTTGTATTAGGCTGTGGTGTCATGTGGAGCTTTCAGATCAGCCAAAAGATGATCCAACCCCACCTCCAGAATTAATCTTGCTACACCTAAATGCCACTGTAGCTGATCTCAAGAAGGAGGCGACCGATGCTTTTCAAGAAGTGTATGCCATGTACAAGAGGTTTCAAGCCGAGGAACTTCTGGAATATGGATCTATCAAGGACAATCTCACTGTAAAGCTCCTGCTTGGAACTAGTGGGTCTGTCCGAATTTTAGGTAAATGCCCTGCAAAACATGGGCTAAACCGATTCCGAATGGAGAGAGGAACAGAGACGTGGAAAGTTGATTGCACATGTGGGGCTAAGGACGATGATGGGGAGAAAATGTTAGCATGTGATACTTGTGGTGTTTGGCAGCATACCAGGTGTGCTGGAATCGATAGCTCTATTGCTGTTCCTTCCAAATTCGTATGCATGAGGTGCATCAAATCATACCGCAAGGAAGCTAAGAAACTGCCAAACCTTGATGAACCAAAAAACTTGACCGTTGACGGACCAAGAACAAGAATCCACTCTGTTGAACCAAAAAATTTGACCGTTAATGGACCAAGAATCTACCCTGTTGATGAACCCAGAATCCACCCTATGGATGGAGCGAAAATCCACCATGCGGACGATGAAGCAAACGCAGCTTGTAAACTGAACAACTCTGTTGATGAAGCAAGAACCCCCAGTAAAGCAAAATCTTCATGCAGGCGTGAAGTGGTGGCAACCGACAGTCCTGCAGTTGCTTGCAACCTGGCTCTGAATTTTGGTGTGCGCTGA 2343 0.4665 MVVNERPSKRMKRRVSADLYDFLTFPAAGDRCCDDVVGGGQPFRKAVQRFLTNYAMVTYPPSLFSSLMTWQILFRIGGLVDGSDLSPAIVTLDIVEEDVTRSRSSVYCDQCRVVGWSGHPVCRKRYHVIIRASSNRMDAYERPCSLCGKSTQLSEPRCKWCDTVITVDDLEDWVYSQIEDNTHVLHGIVHSNGYGHLMTLNGREGGSSLLSGSDIMGFWDRLCVALAVRKVSVMDLSKKFGMEYRLLHAITNGCSWYGNWGYEFGTGSYALTQDSYQKAVNTLSSMPLSDLLFQDRGPRSRLQCVISLYQSLADTELLTIKDLFSFLASLIREFHKPLTTRTSDAETCNVLCAWTSNDVEAVQQALIKVLLASATSSGAKWVTRRALKGALSRGVASPELLDYSLKHLGGKLAAFGMVVKSRCNPASSAVEFRLEPLNVMENEVNANSGYPSKEQVIADLKFLFDSIIHPERMVSYKPKIMRKRVADSARKLLDCKQFMKDYKPDKMVGEQTPPCIRLWCHVELSDQPKDDPTPPPELILLHLNATVADLKKEATDAFQEVYAMYKRFQAEELLEYGSIKDNLTVKLLLGTSGSVRILGKCPAKHGLNRFRMERGTETWKVDCTCGAKDDDGEKMLACDTCGVWQHTRCAGIDSSIAVPSKFVCMRCIKSYRKEAKKLPNLDEPKNLTVDGPRTRIHSVEPKNLTVNGPRIYPVDEPRIHPMDGAKIHHADDEANAACKLNNSVDEARTPSKAKSSCRREVVATDSPAVACNLALNFGVR 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0373 780 CDD PHD_MMD1_like 622 667 - -
Prci7g0373 780 SUPERFAMILY FYVE/PHD zinc finger 617 672 IPR011011 -
Prci7g0373 780 ProSitePatterns Zinc finger PHD-type signature. 623 667 IPR019786 -
Prci7g0373 780 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 12 677 - -
Prci7g0373 780 Pfam PHD-finger 623 669 IPR019787 -
Prci7g0373 780 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 608 674 IPR013083 -
Prci7g0373 780 SMART PHD_3 622 668 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0373 Prci-Chr7 18325690 18329437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0373 86 667 PHD Transcription Factor Family AT5G22260 29.058 3.14e-82 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Prci7g0373 PHD 3.8e-09 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0373 K26271 - gmx:100780558 1043.88