Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0371 ATGGGTTCTTCGAATAACGGTGGTGTGCCGCCGGGGTTCCGGTTTCATCCGACCGATGAAGAGCTTCTTCATTACTACTTGAAGAAGAAGGTGAACTTTCAAAAGTTTGACATGGAGGTCATTAGAGAAGTGGACTTGAACAAGATTGAGCCTTGGGACTTGCAAGAGAGGTGCAGAATAGGGTCAACACCACAGAACGAGTGGTACTTCTTCAGCCACAAGGACAGGAAGTATCCGACAGGGTCAAGGACGAACCGGGCGACCAATGCCGGCTTCTGGAAGGCGACGGGACGAGACAAGTGCATCAGAAACAGCTTTAAGAAGATTGGAATGAGGAAGACTCTCGTCTTCTACAGAGGCCGAGCTCCTCATGGCCAGAAGACTGACTGGATCATGCATGAATATCGCCTTGAAGATGCCGACGATGCGCAGGCCAATCCCAATGAAGATGGCTGGGTGATTTGTAGGGTGTTCAAGAAGAAAAACCTATTCAAGATTGGCAATGAAGGAAGCTCCATGCATAACTCAGACCAACAACTCAATAATAATTCCTCAAGCATCAATCAACCTCGATCCTTCATGCACAGAGAAAGCCAATACTTACTGCATCACCACCATCATCAACAACAACCAAATCCTAGAAACTCATCCGGGTTCGAACTCCAAAAACCTGAGCTTGCTCTTCACTATCCTCCTCACTTGCAAAACCCTCAGTACTCTCTCTTCCAGGCTCAACCCCTCCTTCCAGCTCACTTCAATTCATACTCATCATCAGCCCTAACTTCAGATCACACACCTGCCTTGGCTGCCAAGCAGCTCATGACAAACCCGGCTGGAGACTGCGATAGTGGTAGTGAGGGCTTGAGATACCAAGTTTCTGCAGAGACTGGAAACATGGAGGTTGGTACATGTGAACCCTCAGGTCAAGAGATTGGAACAGGAAGAGAAGATCAAGGGTTTAACGAATGGGGTGTGTTTGATAGGCTTGTGGTCACATCTCATCACCATCTTGGAAATGAAGAATCATCCAAAGGGGTTAGGTTTGAGGATAATGCAAATGCACAACAATCTGTTCATCAAATCAATCATCATCAGCAGCAGCTTTCATTGCGTGGAGAAGTGGACTTTTGGGGCTATGGAAAACAATGA 1149 0.4708 MGSSNNGGVPPGFRFHPTDEELLHYYLKKKVNFQKFDMEVIREVDLNKIEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLEDADDAQANPNEDGWVICRVFKKKNLFKIGNEGSSMHNSDQQLNNNSSSINQPRSFMHRESQYLLHHHHHQQQPNPRNSSGFELQKPELALHYPPHLQNPQYSLFQAQPLLPAHFNSYSSSALTSDHTPALAAKQLMTNPAGDCDSGSEGLRYQVSAETGNMEVGTCEPSGQEIGTGREDQGFNEWGVFDRLVVTSHHHLGNEESSKGVRFEDNANAQQSVHQINHHQQQLSLRGEVDFWGYGKQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0371 382 MobiDBLite consensus disorder prediction 170 190 - -
Prci7g0371 382 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Prci7g0371 382 FunFam NAC domain-containing protein 18 164 - -
Prci7g0371 382 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
Prci7g0371 382 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 224 - -
Prci7g0371 382 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Prci7g0371 382 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0371 Prci-Chr7 18279034 18284106 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0371 3 378 NAC Transcription Factor Family AT1G33280 53.562 1.20e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci7g0371 NAM 5.9e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0371 - - gmx:100775746 548.51