Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0330 ATGGGTTCTTTGCCGGATACTTTTTATTCCCTACCGAGCTTGCTGAAAGTCCGTCTTTCTTACAATAACCTCACTGGGGGCTTGCCTGCCTCATTTAATGGGTCTAGAATCACAAACTTATGGCTTAACAATCAAGTCAATGGACTATCTGATACAATCGACGTATTGTCAGCGATGCCTCAATTATCTCAGGTTTGGCTTCAGAAAAACCAGTTCACAGGTCCCATTCCCGACATGTTCAATAGCAAAAATTTGTTTGACTTGCAACTTGGCGACAATCAGTTAACCAGTTTAGTCCCAACTTCTTTGATGACTCTCTCAAGCTTGGAGAATATTTCTTTGGACAATAATAAGCTACAGGGTCCTATGCCTCAATTCAATAGAGGAGGTGTGCTGGTTACTCTTGAGGGGAACAGCTTCTGCAAAAGTGGTCTGGGATCTTGCGATGATTGTGTTACAACACTGCTTGAGATTGCTGTAGCATTTTGGTATCTAGTTAAATTGGCAGATTCATGGGATGGTAATGGCTCTTGCAGTGATTGGAGTTTTATTGTGTGTACAGATGGAAAGATTACAACGGTGAATATGGCGAGGCAGGTTTTTGGGAGAACAATTTCACCTGCATTTACCAATTTAACGGATTTAAGAAACTTGTATTTGAATGGTAATAATTTGACAGGCACATTACCAAAGAGCTTGAGAACATTGCCTCACCTTGAGATTCTTGATGTATCTAACAATAATCTTTCTGGAGAGGTTCCTAAATCTTCATCAAATGTAATGTTGACAACTATTGGTAATCTTTATCTTGGAAAAGCTTTTGATTATGGGGGTGGAAGAAATGCAAGTAGTCCTGCCACTGGTTTTGACGATAATCCACCAGTTGGAAGTCCGTCTAAAAAGAAAAATAGTACTTCCTTATCATCTGGTTGGATTGCAGGCGTAGTCATTATTGCCTTGTTTTCGGTGGGGGGGGGAAGATTTGGCATTGTTTACAAAGGAGAATTTCATGATGGAACAAAAATTGCAGTGAAGAGGATGGAATCTGTTGCAACAGAAAGCAAAGGATTGAAGGAGTTCCAAGCAGAGATTTCAGTGCTGAGTAAAGTCAGGCACAGGCACGTGGTTTCTCTCTTAGGATATTGCATTAATGGAAATGAAAGGCTTTTAGTTTATGAGCATATGCCTCAAGGAACACTAACACAACATCTTTTTGACTGGCGTCAGAAAGGCTTTGCCCCTCTAACTTGGAAGCAAAGGTTAGTTATAGCTTTGGATGTGGCACGTAGAGTGGAGTATTTACACAGCTTAGCTTACCAAAGCTTCATTCACAGAGATTTGAAGCCTTCCAGCATTCTTCTAGGTGATGACATGAGATTTTGGCTACAGGAAGTAACAACTAAAGCGGATGTCTATTCATTTGGGGTTGTGTTGATGGAATTGATGACTGCTAAAAGGGCAGTAGATGATAGCATCTCAGATGAAGGCTCTCACTTGTTTTCATGGTTTCGTAAGGTTCTAATTCGCAAAGACAACTTCCCAAATGTTATTGATCAAATGTTAGACATAGAAGAAGAGACAACATTGGAGAGCACATGTAAAGTGGCTGAGTCTTGCAGGGAATTGCACGGCTCACAAGCCACACCAAAGGCCAGACATGAGCCATACAGTCAATGA 1677 0.4091 MGSLPDTFYSLPSLLKVRLSYNNLTGGLPASFNGSRITNLWLNNQVNGLSDTIDVLSAMPQLSQVWLQKNQFTGPIPDMFNSKNLFDLQLGDNQLTSLVPTSLMTLSSLENISLDNNKLQGPMPQFNRGGVLVTLEGNSFCKSGLGSCDDCVTTLLEIAVAFWYLVKLADSWDGNGSCSDWSFIVCTDGKITTVNMARQVFGRTISPAFTNLTDLRNLYLNGNNLTGTLPKSLRTLPHLEILDVSNNNLSGEVPKSSSNVMLTTIGNLYLGKAFDYGGGRNASSPATGFDDNPPVGSPSKKKNSTSLSSGWIAGVVIIALFSVGGGRFGIVYKGEFHDGTKIAVKRMESVATESKGLKEFQAEISVLSKVRHRHVVSLLGYCINGNERLLVYEHMPQGTLTQHLFDWRQKGFAPLTWKQRLVIALDVARRVEYLHSLAYQSFIHRDLKPSSILLGDDMRFWLQEVTTKADVYSFGVVLMELMTAKRAVDDSISDEGSHLFSWFRKVLIRKDNFPNVIDQMLDIEEETTLESTCKVAESCRELHGSQATPKARHEPYSQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0330 558 FunFam Leucine-rich repeat receptor-like kinase 150 273 - -
Prci7g0330 558 SUPERFAMILY L domain-like 4 262 - -
Prci7g0330 558 SMART LRR_typ_2 212 235 IPR003591 -
Prci7g0330 558 SMART LRR_typ_2 106 129 IPR003591 -
Prci7g0330 558 SMART LRR_typ_2 236 259 IPR003591 -
Prci7g0330 558 SMART LRR_typ_2 11 34 IPR003591 -
Prci7g0330 558 PANTHER OSJNBA0070M12.3 PROTEIN 464 545 - -
Prci7g0330 558 Pfam Protein tyrosine and serine/threonine kinase 322 457 IPR001245 GO:0004672|GO:0006468
Prci7g0330 558 Gene3D Ribonuclease Inhibitor 151 273 IPR032675 -
Prci7g0330 558 Gene3D Transferase(Phosphotransferase) domain 1 462 553 - -
Prci7g0330 558 Pfam Leucine rich repeat 208 249 IPR001611 GO:0005515
Prci7g0330 558 Pfam Leucine rich repeat 60 119 IPR001611 GO:0005515
Prci7g0330 558 Gene3D Phosphorylase Kinase; domain 1 323 395 - -
Prci7g0330 558 Gene3D Transferase(Phosphotransferase) domain 1 396 461 - -
Prci7g0330 558 Gene3D Ribonuclease Inhibitor 1 146 IPR032675 -
Prci7g0330 558 MobiDBLite consensus disorder prediction 285 306 - -
Prci7g0330 558 SUPERFAMILY Protein kinase-like (PK-like) 323 511 IPR011009 -
Prci7g0330 558 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Prci7g0330 558 ProSiteProfiles Protein kinase domain profile. 317 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0330 Prci-Chr7 17630990 17635028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0330 323 549 Receptor kinase-like Gene Family AT5G39000 37.358 9.49e-44 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Prci7g0330 PK_Tyr_Ser-Thr 1.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0330 K00924 - qsu:112005593 543.888