Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0329 ATGACAAGAGTTGAGAAGATTCCCAAGGAAAAATGCGACAAGATTATATGGGATTCTGATATCATTTTGAACTACAACGTGAGCCTTATTTTGACGGTTAGCTTAAAAGGATGTGGGATCACTAGTATACAGAAAGCTGCGGAGGCTGCTCCTGAATCGAGGCCCAATAAAACCCTCATCATTATTGATTCTGGGATTTACAGAGAGAAGGTAACGGTGCATGCGAGCAAAACAAATTTGATATTGCAAGGTCAAGGATATCTAAACACCGTCATAGAATGGAATAATACTGCCCATTCTACAGGAGGGACTTCTAAAAGTTACTCTGTTGGAGTCTTTGCTTCTAAATTTCTAGCTTATAACATTAGTTTTAGAAACACGGCCCCACCACCATCACCAGGAGAGGAAGGAGCACAGGCTGCGGCTTTAAGAGTGATGGGTGATGAACTAGCATTCTACGGATGTGGAATGTATGGTTTTCAAGCCACCCTCTATGATCACAGTGGAAGACATTACTTCAAAGAATGTTTCATACAAGGTTCCGTTGATTTCATATTTGGAAATGCTAGATCTCTTTATGAGGATTGCACAATAAATTCTGTAGAAAAAGGAGGGTCTATTACAGCTCATGGGAGAGAGTCAAAGAAAGAAGAAAGTGGGTTTTCGTTTGTCAATTGTAAGATTGATGGAAGTGGCAAGGTATTGTTGGGAAGAGCATGGCGGGCTTATGCCACCGTCGTCTTCTCAACAACATATATGTCTAGTGTTGTAGCCCCTGAAGGATGGAGTAATTGGGGTAATTCTGACAGAAACAAGACTGTCTTTTTTGGAGAATATCACTGTTTTGGAGATGGAGCCAACTATTCGCCTAGAGTCTCATATGGAAAGCAACTTAAAGACTATGAAGCAGCTCATTTCACGAATATTTCGCATATCAATGGAAGTGATTGGCTTCCAAACCATAAAAAGTAG 972 0.4064 MTRVEKIPKEKCDKIIWDSDIILNYNVSLILTVSLKGCGNXTSIQKAAEAAPESRPNKTLIIIDSGIYREKVTVHASKTNLILQGQGYLNTVIEWNNTAHSTGGTSKSYSVGVFASKFLAYNISFRNTAPPPSPGEEGAQAAALRVMGDELAFYGCGMYGFQATLYDHSGRHYFKECFIQGSVDFIFGNARSLYEDCTINSVEKGGSITAHGRESKKEESGFSFVNCKIDGSGKVLLGRAWRAYATVVFSTTYMSSVVAPEGWSNWGNSDRNKTVFFGEYHCFGDGANYSPRVSYGKQLKDYEAAHFTNISHINGSDWLPNHKK 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0329 324 SUPERFAMILY Pectin lyase-like 28 320 IPR011050 -
Prci7g0329 324 FunFam Pectinesterase 25 323 - -
Prci7g0329 324 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 26 319 - -
Prci7g0329 324 ProSitePatterns Pectinesterase signature 2. 179 188 IPR033131 -
Prci7g0329 324 Pfam Pectinesterase 32 315 IPR000070 GO:0030599|GO:0042545
Prci7g0329 324 Gene3D - 26 324 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0329 Prci-Chr7 17597698 17599158 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0329 23 319 Carbohydrate Esterase AT1G05310 50.654 1.30e-107 317