Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0304 ATGGTGTTAGTTTTCCAAGAAAACACCTGGTTTGCAAAACGCAAAGACGTCAGGGACTCCTCCACTGAATCTTTCTTCTCTCCGACGTACTTTCTCAACTTAATAGAATGGAATGATATTGCCCATTCTACAGGAGGGACTTTGAAAAGTTACTTTGTTGGAGGTTTCGCTTCCAAATTTCTAGCTTACAACATTAGTTTTAGAAACACAGCCCCACCACCATCACCAAAAGTGGAAGGAGCACAGGCAGCGGCCCTAAGAGTGACTGGTGACGAAGTAGCATTCTATGGATGTGGAATGTACGGTTTTCAAGACACCCTCTATGATCACAGTGGAAGACATTACTTCAAAGAATGTTTCAGACAAGGTTCTGTTGATTACATATTTGGAAATGCTAGATCTCTTTATGAGGATTGCACCATAAGTTCCGTAACGAAAGAAGGAGATGCGCTTACTGGGTATATTACAGCTCATGGGAGAGAGTCAAAGAAAGAAGAAACTGGGTTTTCGTTCATCAATTGTAAGATTGATGGAAGTGGCAAGGTGTTGCTTGGAAGAGCAAGGCGAGTTTATGCCACTGTTGTCTTCTCAACGACATACATGTTTGGTGTTGTAGCCCCTGAAAGATGGAAAAATTGGGGTGATCCCAACAGAAACAAGACTTCCTTTTTCGGAGAATATAACTGTTTTGGAGATGGAGCCAACTATTCATCTAGAGTCTCATTTGGAAAGCAACTTAGAGACTATGAAGCAGCTCGTTTCATGAATATTTCGTATATCAATGGAAGTGATTGGCTTCCAAACCATAAAAAGTAG 816 0.4118 MVLVFQENTWFAKRKDVRDSSTESFFSPTYFLNLIEWNDIAHSTGGTLKSYFVGGFASKFLAYNISFRNTAPPPSPKVEGAQAAALRVTGDEVAFYGCGMYGFQDTLYDHSGRHYFKECFRQGSVDYIFGNARSLYEDCTISSVTKEGDALTGYITAHGRESKKEETGFSFINCKIDGSGKVLLGRARRVYATVVFSTTYMFGVVAPERWKNWGDPNRNKTSFFGEYNCFGDGANYSSRVSFGKQLRDYEAARFMNISYINGSDWLPNHKK 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0304 271 Gene3D - 28 271 IPR012334 -
Prci7g0304 271 Pfam Pectinesterase 46 262 IPR000070 GO:0030599|GO:0042545
Prci7g0304 271 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 34 267 - -
Prci7g0304 271 SUPERFAMILY Pectin lyase-like 34 267 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0304 Prci-Chr7 16642468 16643874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0304 32 266 Carbohydrate Esterase AT1G05310 51.883 1.20e-85 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0304 - - gmx:100802034 337.806