Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0280 ATGGCACAACCCATCAACTTCACATTGCTAGTGATGATGATCCTCATATCTCTCTTCTCAATTCATCATGCCACAGCTGTACCATCCTTGAAAAGGCCTCATCGATATAATACTCAAACCGTTGCTTTCATAAAAGGTTCTTGTCAAACCACTTTGTATCCAAATCTATGCCTTCGTTGCTTATACAAATTTGCCAATTCAAACATTCAAAGCCCACAACAGTTAGCGCATGTGGCCTTATCTGTGAGTCTCTCACGAGCACTATACACCAGAGATTACTTGCTGCAAGTGGCCAGACAATTCAAGGCATTCGAGAGTAGTAATCGTAGAGACTATTTTGTTCTGCAAGATTGCGTGAAGCAGATCAATGATAGTGTGGACCAGCTTGGCCTTTCAATAAAAGAGCTTGAAAGGTTGAATAAGATCCCAAGCACTGAGATCAACGATGGTGTCTTGTGGCACATAAGTAACGTTGAGACATGGGTTAGTACGGCTCTTACTGATGCGAGCACTTGTGTGGATTACTTTCCAGGTCATAGGATGAGTAAGATGAAAGCTAAAATAAGAGGTAAGGTCTTGAACGTTGCGCAAGTCACTAGCAATGCACTTGGCTTGTTTCAAAGATATGCAACCAAGTACAGAGCAGCAGCAACCAAGAGACCCTAA 666 0.4234 MAQPINFTLLVMMILISLFSIHHATAVPSLKRPHRYNTQTVAFIKGSCQTTLYPNLCLRCLYKFANSNIQSPQQLAHVALSVSLSRALYTRDYLLQVARQFKAFESSNRRDYFVLQDCVKQINDSVDQLGLSIKELERLNKIPSTEINDGVLWHISNVETWVSTALTDASTCVDYFPGHRMSKMKAKIRGKVLNVAQVTSNALGLFQRYATKYRAAATKRP 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0280 221 Coils Coil 119 139 - -
Prci7g0280 221 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 209 IPR035513 -
Prci7g0280 221 FunFam Pectinesterase inhibitor 3 39 210 - -
Prci7g0280 221 Pfam Plant invertase/pectin methylesterase inhibitor 43 204 IPR006501 GO:0004857
Prci7g0280 221 SMART PMEI_2 39 205 IPR006501 GO:0004857
Prci7g0280 221 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 205 - -
Prci7g0280 221 NCBIfam pectinesterase inhibitor domain 6 208 IPR006501 GO:0004857
Prci7g0280 221 CDD PMEI-like_3 47 211 - -
Prci7g0280 221 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 208 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0280 Prci-Chr7 15821471 15822567 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0280 5 206 Carbohydrate Esterase AT5G53370 28.436 3.04e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0280 - - pcin:129315147 373.244