Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0249 ATGACTAAAACCCTATATGCTCTCTGCTTCCTCTCGCCTCTCGCCTCTCTGCTTCGTCGGGGTCGTTGCCTCTGTGCTTGGTCGTCGCCACCGTCGTCCAGTGCATTTCCAATCGCTGCCACCGGCTTCACTGTATTCATCCCAGAAACCATGGCAGAAGAGGAGCCCAAGCCCTTGAACTATATTCCCGAGACTATCTTGAAGAAACGAAAAAGCAGCGAAGCGTTGGCCTTGAGGAAAAGGGATCAACTTCAGCAGAAGAAGTTCCAAACAAAGAATTCCAAGGATTATGTCAAAAAACCTGAGGATTTCATCATTGAGTATCGAAACAAGGAGCTTGACCTTGTTAGAATGAAACGACGAGTCAAGAGAATCAAGAAACAACCAGAGTTGTTGATGCCAAATTCAAATTCAAAGTTATTATTAATCATTCGGATTCAAGGAAAAAATGACATGCATCCAAAAACCCGCAAGGTCTTAGACAAATTGAATTTGAAAAGAGTATTCAATGCTGTTTTTGTGAAGGCAAGTGTGGGAATTATGGCAAAGCTGCAGAGGGTCGAACCATATGTCACCTATGGGTATCCTAATATTAAAAGCATAAAGGAACTGATCTACAAGAAGGGATTTGCAAAATTAGACAATCAGAAAGTTCCTCTGACGGACAATAACATTATTGAACAGGCATTAGGAAAGTATGGAATTGTGTGCATGGAAGATATGGTCCATGAAATTGTTAATGTTGGTCCACACTTTGAAGAAGTTGCCAGTTTTTTGTGGCCCTTTGAACTCAGCAAACCAGCTGATGGTTTGCGAGGATCAAAAACTTTGTACAAGGATGGTGGAGACACTGGGAACCGGGAAGATCTCATCAATGAACTAATCGACAAAATGAATTAA 900 0.4189 MTKTLYALCFLSPLASLLRRGRCLCAWSSPPSSSAFPIAATGFTVFIPETMAEEEPKPLNYIPETILKKRKSSEALALRKRDQLQQKKFQTKNSKDYVKKPEDFIIEYRNKELDLVRMKRRVKRIKKQPELLMPNSNSKLLLIIRIQGKNDMHPKTRKVLDKLNLKRVFNAVFVKASVGIMAKLQRVEPYVTYGYPNIKSIKELIYKKGFAKLDNQKVPLTDNNIIEQALGKYGIVCMEDMVHEIVNVGPHFEEVASFLWPFELSKPADGLRGSKTLYKDGGDTGNREDLINELIDKMN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0249 299 PANTHER 60S RIBOSOMAL PROTEIN L7 59 299 IPR039699 -
Prci7g0249 299 SUPERFAMILY Ribosomal protein L30p/L7e 140 299 IPR036919 -
Prci7g0249 299 Pfam Ribosomal L30 N-terminal domain 62 124 IPR012988 -
Prci7g0249 299 NCBIfam 60S ribosomal protein uL30 63 299 IPR005998 GO:0000463|GO:0003735|GO:0022625
Prci7g0249 299 FunFam 60S ribosomal protein L7 140 244 - -
Prci7g0249 299 Coils Coil 108 128 - -
Prci7g0249 299 Gene3D - 140 241 IPR036919 -
Prci7g0249 299 Gene3D - 242 299 IPR036919 -
Prci7g0249 299 CDD Ribosomal_L7_archeal_euk 140 299 IPR035808 -
Prci7g0249 299 Pfam Ribosomal protein L30p/L7e 141 191 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0249 Prci-Chr7 14892574 14897208 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0249 51 299 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 55.777 1.03e-89 266