Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0225 ATGGACATGTCTTCTTCTTCAAGAAGCTCTGCTACGACCTCCCACGGCGCTTCGTCTTCTCCTTACAGAGGCGTTCGCAAGAGGAAGTGGGGTAAATGGGTGTCCGAAATCAGAGAGCCAGGCACCAAGACTAGAATTTGGCTAGGCAGCTTCGAGACGCCGGAGATGGCGGCGACAGCCTACGACGTTGCTGCCCTGCACTTCCGAGGCCGAGACGCTAGGCTCAACTTCCCGGAACTCGCCATGAGCCTTCCCCGTCCGGCCACCAACAATGCCGACGACATTCGCATGGCGGCTCACGAAGCTGCCTTGAGGCTGAGGACCAATCAAGCAGCAGCAGAAGGGGACGTCGACGCAGCTGCCGGTGCCGTCGGTGTCGATGCCGAGGTGGCCCCAGTCACCGTGAGGCTGTCGCCGACGCAGATTCAAGCAATCAACGAGTCTCCGTTGGATTCACCGAGGATGTGGATGCAAATGTCGGAGACACCGATGTTGGATGAACAATACCCGATGATGTTTGAAGAGAATAATGATGAGATATGGGAGAATATGAAGAGTGATTGTCTTTGGGATCCTTAA 579 0.5579 MDMSSSSRSSATTSHGASSSPYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAATAYDVAALHFRGRDARLNFPELAMSLPRPATNNADDIRMAAHEAALRLRTNQAAAEGDVDAAAGAVGVDAEVAPVTVRLSPTQIQAINESPLDSPRMWMQMSETPMLDEQYPMMFEENNDEIWENMKSDCLWDP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0225 192 CDD AP2 22 80 IPR001471 GO:0003700|GO:0006355
Prci7g0225 192 Gene3D AP2/ERF domain 21 79 IPR036955 GO:0003700|GO:0006355
Prci7g0225 192 MobiDBLite consensus disorder prediction 1 20 - -
Prci7g0225 192 ProSiteProfiles AP2/ERF domain profile. 21 78 IPR001471 GO:0003700|GO:0006355
Prci7g0225 192 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Prci7g0225 192 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
Prci7g0225 192 MobiDBLite consensus disorder prediction 1 28 - -
Prci7g0225 192 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 128 - -
Prci7g0225 192 SMART rav1_2 21 84 IPR001471 GO:0003700|GO:0006355
Prci7g0225 192 Pfam AP2 domain 22 70 IPR001471 GO:0003700|GO:0006355
Prci7g0225 192 SUPERFAMILY DNA-binding domain 20 79 IPR016177 GO:0003677
Prci7g0225 192 FunFam Ethylene-responsive transcription factor 2 20 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0225 Prci-Chr7 13921730 13922922 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0225 20 192 AP2-EREBP Transcription Factor Family AT1G71450 61.850 7.71e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci7g0225 AP2 8.2e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0225 - - aprc:113869810 249.21