Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0207 ATGTCATTTGGGTTTAATTCTTCAGCCACCATGGCTAGATTGGCAACAACATCTTCTTCCTTCCACTACCAATGGACTTGCGATGTCTTTATCAATTTTAGAGGTGAAGATACTCGTTATGGTTTTACAGGAAATTTGTATCATTCTCTAAGTCAAAAGGGAATTCGCACCTTCCTTGATGATGAGAAACTACGAAGAGGGGATGAAATTACCCCAGCAGTTCTCAAAGCAATTGAAAATTCTAGGATGGCCACTACTGTATTTTCTAAGAACTATGCTACCTCATCATTTTGTCTAGATGAGCTTGTTAAGATCTATCAGTGCATTAAGGGAAATGGTCGTTTGGTTTTGCCAATTTTTTATGATTTGGAGCCTTCAGAAGTGCGCCATCAAAAGGACAATTATGAGCGAGCACTATCTATGCATACAAAAAACCGCAAAGTTGATGAGGAGAAGATACAAAGTTGGAAACATGCATTGACTGAAGAATCTAACATTTCTGGCTTCCATTTTGATCCAAGGCATGGTTATGAATATCAGTTAATTGAAAGGATTGCGACCGAAATATCTAGTAAAATTGATAGGATTCCTTTATATGTTTCTAGATATCCTGTTGGATTAGAGTCTCGGGTTGTAAGTATAAAGTTTTTATTAGAAATTGGATCAAATGAAGAGGTCAACATGGTAGGAATTTGTGGAATAGGGGGAATAGGTAAAACAACAATAGCACGTGCGGTATATAATTCGGTTGCTGATAATTTTGATGGCATGTGCTTTCTTCATGACATCAAAGAAAAGTCAAGCAAGCTTGGCCTACAACAAATGCAAGAGACAATGATTTCCAAGATTATAGGAGTGGACGTGAAAATACAAGATGCTCATGAAGGAGTTGAAGTAATAAAGATAAGACTCAAACATAAGAAAATCCTTTTGATTCTTGATAATGTTGACAAACACGAGCATCTACAGAAATTAGCTGGTGATTGTGATTGGTTTAATGGTGGGAGTAGGATCATTATAACGACAAGGGATAAGCATTTACTTGTAAGACACGGGATTGAAATTATATATGACATGAAGGCTCTCAATGATGAAGAATCTCTCGAATTGTTAAATTGGAATGCTTTTAGAAATAACCAAGTTAATCCAAGTCACATGATGGTGTTAAATCAAGCAATAAAGTATGCACAAGGCCTTCCACTGGCCCTTGAAGTTATAGGCTCTAACATGTGCGGAAGGAATATAAATGAGTGGGAATCTGCTCATTTTAATTTTCATAAAGAATATTCTTTGACTATTCTGCAGAGTTCTTGA 1314 0.3638 MSFGFNSSATMARLATTSSSFHYQWTCDVFINFRGEDTRYGFTGNLYHSLSQKGIRTFLDDEKLRRGDEITPAVLKAIENSRMATTVFSKNYATSSFCLDELVKIYQCIKGNGRLVLPIFYDLEPSEVRHQKDNYERALSMHTKNRKVDEEKIQSWKHALTEESNISGFHFDPRHGYEYQLIERIATEISSKIDRIPLYVSRYPVGLESRVVSIKFLLEIGSNEEVNMVGICGIGGIGKTTIARAVYNSVADNFDGMCFLHDIKEKSSKLGLQQMQETMISKIIGVDVKIQDAHEGVEVIKIRLKHKKILLILDNVDKHEHLQKLAGDCDWFNGGSRIIITTRDKHLLVRHGIEIIYDMKALNDEESLELLNWNAFRNNQVNPSHMMVLNQAIKYAQGLPLALEVIGSNMCGRNINEWESAHFNFHKEYSLTILQSS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0207 437 PRINTS Disease resistance protein signature 228 243 - -
Prci7g0207 437 PRINTS Disease resistance protein signature 303 317 - -
Prci7g0207 437 PRINTS Disease resistance protein signature 396 410 - -
Prci7g0207 437 Pfam TIR domain 28 192 IPR000157 GO:0007165
Prci7g0207 437 Gene3D - 23 190 IPR035897 -
Prci7g0207 437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 422 IPR044974 GO:0006952
Prci7g0207 437 ProSiteProfiles TIR domain profile. 25 193 IPR000157 GO:0007165
Prci7g0207 437 Gene3D - 361 436 IPR042197 -
Prci7g0207 437 Gene3D - 191 354 IPR027417 -
Prci7g0207 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 428 IPR027417 -
Prci7g0207 437 FunFam Disease resistance protein (TIR-NBS-LRR class) 23 195 - -
Prci7g0207 437 Pfam NB-ARC domain 216 427 IPR002182 GO:0043531
Prci7g0207 437 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 169 IPR035897 -
Prci7g0207 437 SMART till_3 26 166 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0207 Prci-Chr7 12365119 12370948 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0207 28 408 WRKY Transcription Factor Family AT4G12020 27.062 5.27e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0207 - - pcin:129316484 862.448