Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0174 ATGCAAAATCAGCTCCATACTTCACTCTCTTCTTCTGAAGTACTCTTACGTTTGCCTCAACCATCGCTTGCCCTTTCGCTGTTTTCCAACCCTTCTGCTGACGCTGGCTGCACAACAGATTCTTCTCTGGACTCGGTTTCAAATGTTCAGAATTTGATCGTCAATGAAGTTCGCCCCATGAGATATGGACCTGCGGACGAAACTTCTCAAGGAACTTCCAATTTGCCCACAATTTTTCATAATTCGTGGAGGGACAGCTGGGTGTGTCAAATTAATCAAACCAAAACCAACAATCCAATGCAATGTGAAGTTTGTAAAATTGATTTTAATAGCAAGAGTATGTTTGGAGACCACATGTCAGGGAAGAGACACAAGAACATGCAATTGCACAATAATCCCAGCAATGAAATATTATCAGTAACATCTAATGTGAATTTTCAAATCCAAGAAAGTAGTGTCCACGGACAAGAGCTATGTGTACATGAAGGCAAGGATTTAAAGTCCAAGGAACGAAAGCTTTTGAGTAGTGGTGAAGCAGAGCATGCTGATCAAGTGGACTTGACATCTAATAGTGGGATTGGTCCAGAGAAAATTAAGGTTGCTCAACCTGTTCAATGTGAAATTTGCATGATCAATTGTAATAGTAACGATGTTTATATCAAACACTTGTCTGGGAAGAAACACTTGAGGAAACTGGAGAAACTATCTAAATTAAAAAATGATGGTGTAGCTGGTGTCACTACAGCCATCACAACAAATGATTTGCAGCTTGCATCAAATCCGGCTTTTGAGAAGCTGGACGCTAATAAACAAGAACGGATGAATTCATATCATCAACCGGAAAATGCAGTCATATTAGGAGCTCCAGAAAAGGACATTGAAACAAGGAAACGAAAAAATGAACTTGAAGGTGGGACTTCATTAACCTCTACCATGTTTTGCACTCTATCTAATGTCAACAATAATGAGAAGGTCTTTAATTTGCCTGATTTCCCTGCTCAATGCAAAATTTGCATGATCAATTGTAATAGTGAGCATGTATATATCAGTCATGTATCAGGGAAGAAACACATGAGGAACCTGGAGAAACTATCAAAATCAAAAAATGTTGGGGCTGATGCTAGTGGAGCCAGTGTGGTTGCAGCCAGTGTGGTTGCAGCCAGGTTGGATTCAGCAACTGAGCCATTGGAAAAGTTGGACAGTAGTAAACAGGAATCCATCAATTTACATCAACCAGGAATCGCATTCATATTAGATTCTCCAGAAAAGGACATTGAAACAAAGAAACAGAAGATTGAACTTGAAGGTGGTGGGGCTGGAACCTTTTCCTGCAATCAGATCAATGTCAGCAGCCTGGAAATCCTTAATTTGCCTGATTGCCCTGTCCGGTGTGAAATTTGGAAGAAACACCTGAGGAACCTGGAGAAATTATCAAAGTCAAAAAATGTTGGGGCTGATGCTAGTATAGCCGGTGCAGTTGCAGCCACGTTGGATCCAGCAACTGAGCCATTGGAAAAGTCAGACTATAGTAAACGAGAGTCGATCAATTTACATCAACCAGGAATTGCATTCATATTAGAAGCTCCAGAAAAGTACACTGAAACAGAGAAACAGAAGATTGAATTTGAAGGTGGGGCTGGAACCTTTTCCTGCAATCAGTTCCATGTCAACAGCCAAGAAGTCCTTAATTTGCCTGATTGCCCTATCCGGTGTGAAGTTTGCTTGATCGATTGTAATAGTAAGCATGTATATATTGGACATTTATCAGGGAAGAAACACAAGAGGAACCTACAGAATGTATCAAAATCAAAAGATGTTGCAGACGTTATGCCAGCAATTGATATGCAACAAGAAACGAATCCAGCAATTGAGCCACAAGGAAAGCTAGAGACTAATCCACAAGAAGGGATGGATTCACATAAATCAGGAAATATTGTAGTGGAGTTTGAGGCTCCAGATAACGATATCGAGACGAAGAAACATGGAAGTGAACTTATCGATGCGGCAGCCGCAACTAATTTTTTCAAAGTGTGCAATCTATGTAACGCGCCATGCAACAGCCAGACGGTCTTTAATTCTCACCTCCAAGGGAAGAGACATGCTGCTAAGGTGAAGAAGGAGCTGGCAAAGTCAAATACTAGTTGGTGGTTTTGA 2154 0.4076 MQNQLHTSLSSSEVLLRLPQPSLALSLFSNPSADAGCTTDSSLDSVSNVQNLIVNEVRPMRYGPADETSQGTSNLPTIFHNSWRDSWVCQINQTKTNNPMQCEVCKIDFNSKSMFGDHMSGKRHKNMQLHNNPSNEILSVTSNVNFQIQESSVHGQELCVHEGKDLKSKERKLLSSGEAEHADQVDLTSNSGIGPEKIKVAQPVQCEICMINCNSNDVYIKHLSGKKHLRKLEKLSKLKNDGVAGVTTAITTNDLQLASNPAFEKLDANKQERMNSYHQPENAVILGAPEKDIETRKRKNELEGGTSLTSTMFCTLSNVNNNEKVFNLPDFPAQCKICMINCNSEHVYISHVSGKKHMRNLEKLSKSKNVGADASGASVVAASVVAARLDSATEPLEKLDSSKQESINLHQPGIAFILDSPEKDIETKKQKIELEGGGAGTFSCNQINVSSLEILNLPDCPVRCEIWKKHLRNLEKLSKSKNVGADASIAGAVAATLDPATEPLEKSDYSKRESINLHQPGIAFILEAPEKYTETEKQKIEFEGGAGTFSCNQFHVNSQEVLNLPDCPIRCEVCLIDCNSKHVYIGHLSGKKHKRNLQNVSKSKDVADVMPAIDMQQETNPAIEPQGKLETNPQEGMDSHKSGNIVVEFEAPDNDIETKKHGSELIDAAAATNFFKVCNLCNAPCNSQTVFNSHLQGKRHAAKVKKELAKSNTSWWF 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0174 717 Gene3D Classic Zinc Finger 557 605 - -
Prci7g0174 717 Gene3D Classic Zinc Finger 317 374 - -
Prci7g0174 717 Gene3D Classic Zinc Finger 89 132 - -
Prci7g0174 717 Gene3D Classic Zinc Finger 196 243 - -
Prci7g0174 717 SMART c2h2final6 676 700 IPR013087 -
Prci7g0174 717 SMART c2h2final6 333 357 IPR013087 -
Prci7g0174 717 SMART c2h2final6 204 228 IPR013087 -
Prci7g0174 717 SMART c2h2final6 100 124 IPR013087 -
Prci7g0174 717 SMART c2h2final6 569 593 IPR013087 -
Prci7g0174 717 Pfam Zinc-finger of C2H2 type 205 228 - -
Prci7g0174 717 Pfam Zinc-finger of C2H2 type 101 124 - -
Prci7g0174 717 Pfam Zinc-finger of C2H2 type 334 357 - -
Prci7g0174 717 Pfam Zinc-finger of C2H2 type 570 593 - -
Prci7g0174 717 Pfam Zinc-finger of C2H2 type 677 700 - -
Prci7g0174 717 SMART ZnF_U1_5 201 235 IPR003604 GO:0003676|GO:0008270
Prci7g0174 717 SMART ZnF_U1_5 97 130 IPR003604 GO:0003676|GO:0008270
Prci7g0174 717 SMART ZnF_U1_5 671 707 IPR003604 GO:0003676|GO:0008270
Prci7g0174 717 SMART ZnF_U1_5 330 364 IPR003604 GO:0003676|GO:0008270
Prci7g0174 717 SMART ZnF_U1_5 566 600 IPR003604 GO:0003676|GO:0008270
Prci7g0174 717 SUPERFAMILY beta-beta-alpha zinc fingers 563 599 IPR036236 -
Prci7g0174 717 Gene3D Classic Zinc Finger 655 707 - -
Prci7g0174 717 SUPERFAMILY beta-beta-alpha zinc fingers 94 127 IPR036236 -
Prci7g0174 717 SUPERFAMILY beta-beta-alpha zinc fingers 312 364 IPR036236 -
Prci7g0174 717 SUPERFAMILY beta-beta-alpha zinc fingers 195 235 IPR036236 -
Prci7g0174 717 ProSitePatterns Zinc finger C2H2 type domain signature. 102 124 IPR013087 -
Prci7g0174 717 PANTHER ZINC FINGER PROTEIN 385B-LIKE 571 709 - -
Prci7g0174 717 SUPERFAMILY beta-beta-alpha zinc fingers 675 710 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0174 Prci-Chr7 10802404 10807398 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0174 571 702 C2H2 Transcription Factor Family AT5G61190 28.058 4.01e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0174 - - pcin:129315651 1420.6