Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0173 ATGCAAAATCAGCTCCATACTTCACTCTCTTCTTCTGAAGTACTCTTACGTTTGCCTCAACCATCGCTTGCCCTTTCGCTGTTTTCCAACCCTTCTGCTGACGCTGGCTGCACAACAGATTCTTCTCTGGACTCGGTTTCAAATGTTCAGAATTTGATCGTCAATGAAGTTCGCCCCATGAGATATGGACCTGTGGACTTGACATCTAATAGTGGGATTGGTCCAGAGAAAATTAAGGTTGCTCAACCTGTTCAATGTGAAATTTGCATGATCAATTGTAATAGTAACGATGTTTATATCAAACACTTGTCTGGGAAGAAACACTTGAGGAAACTGGAGAAACTATCTAAATTAAAAAATGATGGTGTAGCTGGTGTCACTACAGCCATCACAACAAATGATTTGCAGCTTGCATCAAATCCGGCTTTTGAGAAGCTGGACGCTAATAAACAAGAACGGATGAATTCATATCATCAACCGGAAAATGCAGTCATATTAGGAGCTCCAGAAAAGGACATTGAAACAAGGAAACGAAAAAATGAACTTGAAGGTGGGACTTCATTAACCTCTACCATGTTTTGCACTCTATCTAATGTCAACAATAATGAGAAGGTCTTTAATTTGCCTGATTTCCCTGCTCAATGCAAAATTTGCATGATCAATTGTAATAGTGAGCATGTATATATCAGTCATGTATCAGGGAAGAAACACATGAGGAACCTGGAGAAACTATCAAAATCAAAAAATGTTGGGGCTGATGCTAGTGGAGCCAGTGTGGTTGCAGCCAGTGTGGTTGCAGCCAGGTTGGATTCAGCAACTGAGCCATTGGAAAAGTTGGACAGTAGTAAACAGGAATCCATCAATTTACATCAACCAGGAATCGCATTCATATTAGATTCTCCAGAAAAGGACATTGAAACAAAGAAACAGAAGATTGAACTTGAAGGTGGTGGGGCTGGAACCTTTTCCTGCAATCAGATCAATGTCAGCAGCCTGGAAATCCTTAATTTGCCTGATTGCCCTGTCCGGTGTGAAATTTGGAAGAAACACCTGAGGAACCTGGAGAAATTATCAAAGTCAAAAAATGTTGGGGCTGATGCTAGTATAGCCGGTGCAGTTGCAGCCACGTTGGATCCAGCAACTGAGCCATTGGAAAAGTCAGACTATAGTAAACGAGAGTCGATCAATTTACATCAACCAGGAATTGCATTCATATTAGAAGCTCCAGAAAAGTACACTGAAACAGAGAAACAGAAGATTGAATTTGAAGGTGGGGCTGGAACCTTTTCCTGCAATCAGTTCCATGTCAACAGCCAAGAAGTCCTTAATTTGCCTGATTGCCCTATCCGGTGTGAAGTTTGCTTGATCGATTGTAATAGTAAGCATGTATATATTGGACATTTATCAGGGAAGAAACACAAGAGGAACCTACAGAATGTATCAAAATCAAAAGATGTTGCAGACGTTATGCCAGCAATTGATATGCAACAAGAAACGAATCCAGCAATTGAGCCACAAGGAAAGCTAGAGACTAATCCACAAGAAGGGATGGATTCACATAAATCAGGAAATATTGTAGTGGAGTTTGAGGCTCCAGATAACGATATCGAGACGAAGAAACATGGAAGTGAACTTATCGATGCGGCAGCCGCAACTAATTTTTTCAAAGTGTGCAATCTATGTAACGCGCCATGCAACAGCCAGACGGTCTTTAATTCTCACCTCCAAGGGAAGAGACATGCTGCTAAGGTGAAGAAGGAGCTGGCAAAGTCAAATACTAGTTGGTGGTTTTGA 1794 0.4119 MQNQLHTSLSSSEVLLRLPQPSLALSLFSNPSADAGCTTDSSLDSVSNVQNLIVNEVRPMRYGPVDLTSNSGIGPEKIKVAQPVQCEICMINCNSNDVYIKHLSGKKHLRKLEKLSKLKNDGVAGVTTAITTNDLQLASNPAFEKLDANKQERMNSYHQPENAVILGAPEKDIETRKRKNELEGGTSLTSTMFCTLSNVNNNEKVFNLPDFPAQCKICMINCNSEHVYISHVSGKKHMRNLEKLSKSKNVGADASGASVVAASVVAARLDSATEPLEKLDSSKQESINLHQPGIAFILDSPEKDIETKKQKIELEGGGAGTFSCNQINVSSLEILNLPDCPVRCEIWKKHLRNLEKLSKSKNVGADASIAGAVAATLDPATEPLEKSDYSKRESINLHQPGIAFILEAPEKYTETEKQKIEFEGGAGTFSCNQFHVNSQEVLNLPDCPIRCEVCLIDCNSKHVYIGHLSGKKHKRNLQNVSKSKDVADVMPAIDMQQETNPAIEPQGKLETNPQEGMDSHKSGNIVVEFEAPDNDIETKKHGSELIDAAAATNFFKVCNLCNAPCNSQTVFNSHLQGKRHAAKVKKELAKSNTSWWF 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0173 597 Gene3D Classic Zinc Finger 535 587 - -
Prci7g0173 597 PANTHER OS06G0651300 PROTEIN-RELATED 443 586 - -
Prci7g0173 597 Pfam Zinc-finger of C2H2 type 214 237 - -
Prci7g0173 597 Pfam Zinc-finger of C2H2 type 557 580 - -
Prci7g0173 597 Pfam Zinc-finger of C2H2 type 450 473 - -
Prci7g0173 597 Pfam Zinc-finger of C2H2 type 85 108 - -
Prci7g0173 597 SMART ZnF_U1_5 551 587 IPR003604 GO:0003676|GO:0008270
Prci7g0173 597 SMART ZnF_U1_5 81 115 IPR003604 GO:0003676|GO:0008270
Prci7g0173 597 SMART ZnF_U1_5 446 480 IPR003604 GO:0003676|GO:0008270
Prci7g0173 597 SMART ZnF_U1_5 210 244 IPR003604 GO:0003676|GO:0008270
Prci7g0173 597 SUPERFAMILY beta-beta-alpha zinc fingers 555 590 IPR036236 -
Prci7g0173 597 SUPERFAMILY beta-beta-alpha zinc fingers 192 244 IPR036236 -
Prci7g0173 597 Gene3D Classic Zinc Finger 437 485 - -
Prci7g0173 597 Gene3D Classic Zinc Finger 76 123 - -
Prci7g0173 597 Gene3D Classic Zinc Finger 197 254 - -
Prci7g0173 597 SMART c2h2final6 449 473 IPR013087 -
Prci7g0173 597 SMART c2h2final6 556 580 IPR013087 -
Prci7g0173 597 SMART c2h2final6 213 237 IPR013087 -
Prci7g0173 597 SMART c2h2final6 84 108 IPR013087 -
Prci7g0173 597 SUPERFAMILY beta-beta-alpha zinc fingers 443 479 IPR036236 -
Prci7g0173 597 SUPERFAMILY beta-beta-alpha zinc fingers 76 115 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0173 Prci-Chr7 10802404 10807398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0173 451 582 C2H2 Transcription Factor Family AT5G61190 28.058 3.59e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0173 - - pcin:129315651 1048.5