Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0171 ATGAAGCAGAGTAATCAGAAATTGGTTGGTTCAAGGATGACGATGATATTTGGAACGTTGCTTTTTCTGGGATTCTTGTCAGCTCAGATTCAATTCGTCTTTTCTTTCACTGATCCTCAAGATGTTTCTGTATTAAGATCTTTAAAGGATATGTGGCAAAACACACCACCCAATTGGGATAAATCAGATGACCCTTGTGGAGCACCTTGGGAAGGAGTCACCTGCAACAGATCCAGAGTCACCTCACTGGGATTGTCAACAATGGGCCTCCAAGGTAAACTAAGTGGAGATATTGGGGGTCTTACTGAATTAAGATCCTTGGACTTGTCGTTTAACAGAGGCTTGAAGGGTCCTCTGTCTCCTCAATTAGGAGACCTAAGAAATCTAAACATATTGATTTTGGCTGGTTGCAGCTTCAGTGGTAAAATTCCAAATGAATTGGGAAATCTCTCTGAGCTATCTTTCTTGGCATTAAATTCGAACAATTTGTCTGGAGAAATACCTGCTTCATTGGGAAATCTTTCAAAATTATATTGGTTGGACTTAGCAGACAATCAATTAACTGGGTCAATTCCTGTGTCCACCTCCATATCTCCAGGATTTGACATGCTTTTAAAGGCCAAGCACTTCCATTTCAATAAGAACAAGCTTTCAGGTCCCATTCCGTCAAACTTATTCAACTCTGAGATGGTGCTCATCCACGTGCTGTTTGATGGGAATCAATTAGCAGGGACAATTCCATTTACATTAGGATTGGTTCAAACACTTGAAGTTCTTCGGCTTGATAGAAACTTCTTGGCTGGAGAAGTCCCGTCTAATCTCAACAACCTAACCAACCTCAATGAATTGAATTTGGCACATAATAAATTGACAGGTTCTCTACCAGATTTGTCTCAGATGGATACCCTCAATTACGTGGATCTGAGTAACAATTCTTTTGATCCTTCTCAATCCCCAATATGGTTCACAACTTTACCATCACTCACCACTTTAATTATGGAGTTTGGATCACTTGAAGGTCCTTTGCCATCAAAACTTTTCAGCAGTCCCCAAATACAACAAGTGAAGTTAAGGCACAATGCATTGAACAACACTTTGGATATGGGTGACAGCATTAGCCCTCAATTACAACTTGTAGATTTACAAGACAACCAAATTACTTCAGTAACACTCAGTTCTGGATACAAAAATACACTGATTTTGATTGGGAATCCAGTGTGCCTTACTGCTCTCTCAAATACCAATTACTGCCAACTGCAACAACAACCTAAAAAGCCTTATTCCACTAGCTTGGCTAATTGTGGAAACAAATCTTGTCCTCCTGATCAGAAGTTAAGCCCACAAAGTTGTGAATGTGCCTACCCATATGAAGGAATTTTGTATTTTAGAGGACCCTTGTTTAGAGAATTATCAAATGCAAATACATTTCATTCTCTTGAGATGAGTTTGTGGGTGAAGTTAGGTCTCACTCCGGGTTCAGTATCTATACAAAACCCATTTTTCAACAGTGATGATTATCTTCAAGTACAATTAGCACTCTTTCCTCCATCAGGAACATACTTCAATAGGTCTGAGATTCAAAGAATTGGGTTTCAACTAAGTAATCAAACATATAAGCCTCCACCAGAGTTTGGACCATATTACTTCATTGCATTTCCTTATGCTTTCCCAGAATCACGTCGAGCAACTTCTCTAAGCAAGCCTATTGTCATTGGGATAGCAATTGGCTGCTCATTTCTGGTTTTGAGCCTCATAGGGCTAGGGATATATGCACTTTTACAAAAGAAACGTGCAGAGAAAGCCATTGTACTAAGCAGGCCCTTTGCATCATGGACACCTAGTGGGAAGGATAGTGGAGGAGCTCCACAACTAAAAGGAGCAAGATGGTTCTCTTATGATGAACTAAAAAAGTGTACCTCAAATTTCTCGCACTACAATGAGTTAGGATTTGGAGGTTATGGCAAGGTGTACAAAGGGGTTCTTCCTGATGGACAAATGGTTGCAATAAAACGAGCCCAACAAGGATCAATGCAAGGAGGACTTGAGTTCAAGACTGAAATTGAATTGCTTTCACGAGTTCATCACAAGAATCTTGTTGCTCTTGTTGGCTTCTGCTTTGAACAAGGAGAGCAAATGTTGGTCTATGAATATATGCCCAATGGAACACTCAGAGATTGCTTATCTGGGAGATGTGGGATTTATCTTGATTGGAAGAGGAGGTTAAGAATTGCTCTTGGGTCAGCAAGAGGACTTGCTTACTTACATGAACTTGCTAACCCTCCCATAATTCATAGAGATGTCAAGTCCTCTAATATCTTGCTAGATGAGAATTTGACTGCAAAAGTTGCAGATTTTGGCTTATCAAAGCTAGCAACAGATGGTGGAAAAGGCCATGTTTCCACTCAGGTTAAAGGCACATTGGGTTATCTTGATCCTGAATATTACATGACCCAACAATTAACTGAGAAGAGTGATGTATATAGTTTTGGTGTCGTAATGCTTGAACTCATAACGGCAAGGCAACCTATTGAGAAAGGAAAGTACATTGTGCGAGAAGTAAGAACATTGATAAATAAGAATGAGCAAGAATATTGTGGTTTAAAAGAACTTATGGATCTAGTGGTTATGGAAACTTGTAACCTTGGAGGGCTTCATACATTATTGGATCTCACAATGCAATGTGTTGAGGAATCTGCTTCTAATCGTCCAACAATGAGTGAAGTTGTGAAAGCTCTTGAAATCATTCTTCAAAATGATGGCTTGAACAGTACAAATTCCACTTCTGCTTCTTCTTCAGCAACAGACTTTGCACTTTCAAAGACTTCTCTCACACATCCTTACATGGAAACTTTCAGCAAAAAGGACATTGTTAATGAGACAAATGCCTTTGACTATAGTGGAGGATACACACTCCCTGCAAAAATTGAACCCAAATAG 2937 0.3956 MKQSNQKLVGSRMTMIFGTLLFLGFLSAQIQFVFSFTDPQDVSVLRSLKDMWQNTPPNWDKSDDPCGAPWEGVTCNRSRVTSLGLSTMGLQGKLSGDIGGLTELRSLDLSFNRGLKGPLSPQLGDLRNLNILILAGCSFSGKIPNELGNLSELSFLALNSNNLSGEIPASLGNLSKLYWLDLADNQLTGSIPVSTSISPGFDMLLKAKHFHFNKNKLSGPIPSNLFNSEMVLIHVLFDGNQLAGTIPFTLGLVQTLEVLRLDRNFLAGEVPSNLNNLTNLNELNLAHNKLTGSLPDLSQMDTLNYVDLSNNSFDPSQSPIWFTTLPSLTTLIMEFGSLEGPLPSKLFSSPQIQQVKLRHNALNNTLDMGDSISPQLQLVDLQDNQITSVTLSSGYKNTLILIGNPVCLTALSNTNYCQLQQQPKKPYSTSLANCGNKSCPPDQKLSPQSCECAYPYEGILYFRGPLFRELSNANTFHSLEMSLWVKLGLTPGSVSIQNPFFNSDDYLQVQLALFPPSGTYFNRSEIQRIGFQLSNQTYKPPPEFGPYYFIAFPYAFPESRRATSLSKPIVIGIAIGCSFLVLSLIGLGIYALLQKKRAEKAIVLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTSNFSHYNELGFGGYGKVYKGVLPDGQMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEYMPNGTLRDCLSGRCGIYLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSSNILLDENLTAKVADFGLSKLATDGGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITARQPIEKGKYIVREVRTLINKNEQEYCGLKELMDLVVMETCNLGGLHTLLDLTMQCVEESASNRPTMSEVVKALEIILQNDGLNSTNSTSASSSATDFALSKTSLTHPYMETFSKKDIVNETNAFDYSGGYTLPAKIEPK 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0171 978 SUPERFAMILY L domain-like 50 417 - -
Prci7g0171 978 Gene3D Transferase(Phosphotransferase) domain 1 718 938 - -
Prci7g0171 978 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 718 929 - -
Prci7g0171 978 FunFam Leucine-rich repeat protein kinase family protein 610 717 - -
Prci7g0171 978 ProSiteProfiles Leucine-rich repeat profile. 279 301 IPR001611 GO:0005515
Prci7g0171 978 ProSitePatterns Protein kinases ATP-binding region signature. 648 670 IPR017441 GO:0005524
Prci7g0171 978 SUPERFAMILY Protein kinase-like (PK-like) 627 931 IPR011009 -
Prci7g0171 978 Gene3D Ribonuclease Inhibitor 196 298 IPR032675 -
Prci7g0171 978 ProSitePatterns Serine/Threonine protein kinases active-site signature. 762 774 IPR008271 GO:0004672|GO:0006468
Prci7g0171 978 SMART serkin_6 642 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0171 978 ProSiteProfiles Protein kinase domain profile. 642 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci7g0171 978 FunFam Leucine-rich repeat family protein 40 196 - -
Prci7g0171 978 FunFam Predicted protein 199 420 - -
Prci7g0171 978 Pfam Leucine rich repeat N-terminal domain 39 76 IPR013210 -
Prci7g0171 978 PANTHER RECEPTOR-LIKE PROTEIN 55 46 916 - -
Prci7g0171 978 Gene3D Phosphorylase Kinase; domain 1 616 717 - -
Prci7g0171 978 Gene3D Ribonuclease Inhibitor 40 195 IPR032675 -
Prci7g0171 978 Gene3D Ribonuclease Inhibitor 299 408 IPR032675 -
Prci7g0171 978 Pfam Protein tyrosine and serine/threonine kinase 645 912 IPR001245 GO:0004672|GO:0006468
Prci7g0171 978 CDD STKc_IRAK 648 915 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0171 Prci-Chr7 10727566 10738168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0171 8 978 Receptor kinase-like Gene Family AT1G79620 70.659 0.0 1428
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Prci7g0171 PK_Tyr_Ser-Thr 3.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0171 - - gmx:100792249 1559.66