Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0138 ATGTACCCAAAACGGTCTAACCAAGGTGATGGACCTGTTTCCAGACCAGTGCGCACTAGTGATAGGATCAAGACGAGGCCAAACATATATGGTCGACCATACTTGTATTACAGCTCAAAGCGCACCAGGAAAAGCAAGAACAAGACAAGGACAGCGGCTTCCCAAATTGCCAAGATGTTGCGGCCAAGAGATCGGCCATCACAAAATCCAATTGCTTCTAATTCTGCAGCTACCAATCTTAGACGTTCAACTAGGAAGAGAAGGATTTCTGTAAATCTTGAAGGTTTCACTGACAGTTCTGGAGCTGAGGATGAAGACTTAATGAGGCCCACTTTTCAACAATCGAGAAAGCAGATTGACCATAGTGTGAGTCAGGATGAGTTGATGTCTCGCAAGCACAAAAAGCTGGAAACTAAACCGAACCCTCGGCGTGAAGGTCTGCGGCCTCGTCGTTCGAAGGCTGTTGCTAGAGAACCCTTAAATTCAGAATCTGATGATGAGCAAGATTTTTCAGAAGAAAAGGTTGGACAGGATGAAACAGAAAATGGAAATGATATGGAGGAAAATGATGCAGATGATGGTCAGGATGAGATTGAAGGAGATGCTGAGGGTGAAGATGAAGGTGAGGATGAGGATGAGGATGAGGATGAAGGAGATGAAGATGGTGATGACGAAGATGGTGAAGAAGAGCAGGATGGAAGAAGGCGCTATGATCTTCGAAATCGTGCAGATGTTCGCAGATTCTCGATGGAAGAAGGGAAGGCCCAGCCAAGGTCACCCCGAAGAGTGTTACATCAAGGTATGGGCACAAAGGTTGGCAGGGATGTCAGGAAGGGTGGATCAAGAGTTCATAAGCGATATCGTTTAGCAAGACCTGAAGATTCTGATGACTCTATTCTTGTGGATGAACTGGATCAAGGTCCTGCTATTCCATGGGGTAGAGGTGGTAGCAGGTCTGGCCCCCCTTGGCTTTTTGGTGGACTAGACATGCATGGAACAACAGCATGGGGATTGAATCTTGCCGCATCAGGTTGGGGTCATCAAGGCGACGCTTTAGCTACATTGACATCTGGAATACAAACTGCTGGACCAAGCTCTAAAGGAGGTGCAGATATTCAACCCTTACAGGTTGATGACAGTGTTAGTTTTGATGACATAGGTGGGCTCTCTGAATATATTGATGCTCTGAAGGAAATGATTTTCTTTCCATTACTGTATCCAGATTTCTTTGCAAGTTATCATATTACTCCACCTAGAGGGGTGTTGTTATGTGGGCCCCCTGGCACAGGTAAAACACTAATTGCAAGAGCTTTGGCTTGTGCTGCATCAAAAGCTGGTCAGAAGGTTAGCTTTTACATGCGCAAGGGAGCAGATGTACTGAGCAAGTGGGTTGGTGAGGCTGAAAGACAATTGAAATTACTCTTCGAGGAAGCACAAAAGAATCAACCTTCTATTATTTTCTTTGATGAAATAGATGGACTAGCTCCTGTGAGATCTAGCAAGCAAGAACAGATTCACAATTCTATTGTGTCCACTTTGCTTGCTTTGATGGATGGTCTTGATTCTCGTGGACAAGTAGTTTTAATTGGAGCCACCAATAGGATTGATGCCATTGATGGGGCCTTGCGCCGCCCGGGTAGATTTGATCGTGAATTCAACTTTCCCTTGCCTGGTTGTGAGGCTCGTGCTGAAATATTGGACATTCATACTCGTAAGTGGAGGCATCCTCCTTCAAAGGAACTGAAAATGGAGCTTGCCGCTAGTTGTGTTGGATATTGTGGTGCTGACCTAAAGGCTCTCTGTACTGAAGCTGCCATCCGTGCTTTTCGTGAAAAATATCCACAGGTTTATATGAGTGATGACAAATTTTTAATAGATGTTGATTCAGTAAAGGTTGAAAAGTATCACTTTATTGATGCAATGTCAACAATCACTCCTGCTGCTCATAGGGGTGCAATTGTACACTCTAGGCCATTGTCACTAGTTGTTCAACCATGCCTACGAAGACATCTAGAGGAGGTCATGAAAATTATATCTGATATTTTTCCTCCAGCTGCTGTTGCATCAGAATTGTCCAAACTTTCTATGCTTTCCTATGGTTCTGCTATTCCACTTGTCTATCGGCCTAGGCTTCTACTTTGTGGTGGTGAAGGTACCGGGCTGGACCATCTTGGACCTGCAGTTTTACACGAACTGGAAAAATTTCCTGTTCATTCATTAGGACTTCCATCTCTCCTCTCGGATCCCAGTGCTAAGACGCCAGAGGAGGCTTTAGTACATATATTTGGTGAAGCTAGAAGAGCAATCCCATCTATTCTCTATTTACCACAGTTCAATGTTTGGTGGGAAACTGCACACGAACAACTCAGGGCTGTTCTTCTGACTTTGCTAGATGAACTGCCTTCTGACATCCCTATATTATTACTCGGAACATCATCAGTGCTGCATGATGAAGTTGATGAAGTGCCTCCTTCATTGTTTCCTTCCCATTCAGTCTATAACATGAACTTACCATCTACTGAAGATAGAACATCATTTTTCAATTGTTTGATTGATGCTGCTTTATCAGTCTCATTAGAGAGAACGAGCAAAAAATCCCAAAAAACAGGTTCCCTTCCTGAACTTCTCAAGGCACCAAAATTAACAGGTGGTCCTAAGGTATCTGAGCTCAAAGCAACAGTTGACGCTGAGCAGCATGCCCTTCGCAGATTGCGAATGTGCCTTAGAGATGTTTGCAACCGGATATTATATGACAAACGCTTTACTGCCTTCCATTATCCGGTATCAGATGAAGATGCACCTAACTATCGCACAATAATTCAGAACCCAATGGACATGGCTACCATACTGCAGCATGTTGATAATGGCCACTATATTACATGTTCGGCATTCTTACAGGACATTGATCTTATTGTTTCAAATGCTAAGGCTTATAATGGAGAGGACTACAATGGTTCAAGGATTGTCAGTAGAGCTTGTGAGCTTCGTGATGCAGTGCATGGAATGCTCTCACAGATGGATCCAGCACTGGTTGCATACTGTGACAAGATTGCTGCCCAAGGTGGCCCACTTAATTTGCCTGATGAATTTGGGGGATCTACATTCCCATCTACTCCTGTTGTTCAGCTGGGTACCACCACTAGAATGAGTGCTCGACTTCGTAATGTCCAACCTGAGGTTAATATGGATCAAAGCTATGAAGCATTGAAGCGGACAAAAAGGAGCACCGATGTTCCACATGCAGATGACAAGTCACGACAAGATCCTCTGCCACCAAAGACTTTACCGGAACATCAAGCGAGTGAAGTCACTTGTGAAAGGGCTGAACCTGTTTCAGTTGATGAAAATCTACATGGAGCTAGTACATGTGGACAAGCTGATGATAGTAGCCCGCCAGATGTCACAATGTCAGATGGTGAGGTTTCAAGCCAAGTGGAGTCTGTGAAGCAGCTTTTTGTGAAGCATAGTGAAAATTACAGCATTCCACAGCTTGAAAGGATTTACACAAGAATCATGAAGGGCATTTTTGAAGCCGAAGGCAAAGGAACGAAAAATCTGAAGACTTGGGTGTTGGAGTTTTTGTTTACATTTGTAGAAGATGATGCAAATTTCTAG 3615 0.4396 MYPKRSNQGDGPVSRPVRTSDRIKTRPNIYGRPYLYYSSKRTRKSKNKTRTAASQIAKMLRPRDRPSQNPIASNSAATNLRRSTRKRRISVNLEGFTDSSGAEDEDLMRPTFQQSRKQIDHSVSQDELMSRKHKKLXETKPNPRREGLRPRRSKAVAREPLNSESDDEQDFSEEKVGQDETENGNDMEENDADDGQDEIEGDAEGEDEGEDEDEDEDEGDEDGDDEDGEEEQDGRRRYDLRNRADVRRFSMEEGKAQPRSPRRVLHQGMGTKVGRDVRKGGSRVHKRYRLARPEDSDDSILVDELDQGPAIPWGRGGSRSGPPWLFGGLDMHGTTAWGLNLAASGWGHQGDALATLTSGIQTAGPSSKGGADIQPLQVDDSVSFDDIGGLSEYIDALKEMIFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQKNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRIDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWRHPPSKELKMELAASCVGYCGADLKALCTEAAIRAFREKYPQVYMSDDKFLIDVDSVKVEKYHFIDAMSTITPAAHRGAIVHSRPLSLVVQPCLRRHLEEVMKIISDIFPPAAVASELSKLSMLSYGSAIPLVYRPRLLLCGGEGTGLDHLGPAVLHELEKFPVHSLGLPSLLSDPSAKTPEEALVHIFGEARRAIPSILYLPQFNVWWETAHEQLRAVLLTLLDELPSDIPILLLGTSSVLHDEVDEVPPSLFPSHSVYNMNLPSTEDRTSFFNCLIDAALSVSLERTSKKSQKTGSLPELLKAPKLTGGPKVSELKATVDAEQHALRRLRMCLRDVCNRILYDKRFTAFHYPVSDEDAPNYRTIIQNPMDMATILQHVDNGHYITCSAFLQDIDLIVSNAKAYNGEDYNGSRIVSRACELRDAVHGMLSQMDPALVAYCDKIAAQGGPLNLPDEFGGSTFPSTPVVQLGTTTRMSARLRNVQPEVNMDQSYEALKRTKRSTDVPHADDKSRQDPLPPKTLPEHQASEVTCERAEPVSVDENLHGASTCGQADDSSPPDVTMSDGEVSSQVESVKQLFVKHSENYSIPQLERIYTRIMKGIFEAEGKGTKNLKTWVLEFLFTFVEDDANF 1205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0138 1205 MobiDBLite consensus disorder prediction 1 241 - -
Prci7g0138 1205 Pfam ATPase family associated with various cellular activities (AAA) 422 557 IPR003959 GO:0005524|GO:0016887
Prci7g0138 1205 FunFam ATPase family, AAA domain-containing 2 380 563 - -
Prci7g0138 1205 Gene3D - 558 643 - -
Prci7g0138 1205 PRINTS Bromodomain signature 968 987 IPR001487 GO:0005515
Prci7g0138 1205 PRINTS Bromodomain signature 934 950 IPR001487 GO:0005515
Prci7g0138 1205 PRINTS Bromodomain signature 950 968 IPR001487 GO:0005515
Prci7g0138 1205 SUPERFAMILY Bromodomain 900 1014 IPR036427 GO:0005515
Prci7g0138 1205 ProSiteProfiles Bromodomain profile. 925 987 IPR001487 GO:0005515
Prci7g0138 1205 MobiDBLite consensus disorder prediction 120 165 - -
Prci7g0138 1205 SMART bromo_6 902 1009 IPR001487 GO:0005515
Prci7g0138 1205 MobiDBLite consensus disorder prediction 1119 1142 - -
Prci7g0138 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 706 855 IPR027417 -
Prci7g0138 1205 Gene3D - 894 1022 IPR036427 GO:0005515
Prci7g0138 1205 MobiDBLite consensus disorder prediction 1051 1142 - -
Prci7g0138 1205 FunFam ATPase family AAA domain-containing protein 894 1022 - -
Prci7g0138 1205 MobiDBLite consensus disorder prediction 183 229 - -
Prci7g0138 1205 PANTHER AAA DOMAIN-CONTAINING 40 1019 IPR045199 -
Prci7g0138 1205 SMART AAA_5 418 559 IPR003593 GO:0016887
Prci7g0138 1205 Pfam AAA+ lid domain 585 621 IPR041569 -
Prci7g0138 1205 ProSitePatterns Bromodomain signature. 922 979 IPR018359 -
Prci7g0138 1205 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 647 IPR027417 -
Prci7g0138 1205 Pfam Bromodomain 916 983 IPR001487 GO:0005515
Prci7g0138 1205 CDD Bromo_AAA 902 1012 - -
Prci7g0138 1205 ProSitePatterns AAA-protein family signature. 527 545 IPR003960 GO:0005524|GO:0016887
Prci7g0138 1205 Gene3D - 380 650 IPR027417 -
Prci7g0138 1205 MobiDBLite consensus disorder prediction 1067 1092 - -
Prci7g0138 1205 FunFam ATPase family AAA domain-containing protein 2B 558 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0138 Prci-Chr7 8956859 8977976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0138 368 616 Calmodulin-binding Proteins AT3G56690 37.945 1.35e-41 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0138 K22531 - gmx:100787765 1883.61