Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0118 ATGATTTCTGTTGAATCCCACCAGAACCCAGGCCTCTCTTCTCCTCCTTCTCCAAAACCTGCTCCAAACGATTCGAATTCTGCAGATTCTCCCCAAACTACTCATATCTTCAAGTCAAAATTACCAGACATACCTATTTCCAACCATCTTCCTCTTCACACTTACTGCTTCGAGAATCTCTCTCAATTCGCTGACCGTCCCTGCCTTATCGTCGGCTCCACCGGCAAAATTTACTCCTATGCGGAAACTCACCTCCAGTCGAGGAAGATTGCCGCTGGCTTCTCCAAACTCGGGATCAAGAAAGGCGATGTGATTATGATACTACTCCAGAATTCTGCCGAATTCGCGTTGTCGTTCTTTGCTGCTTCCATGATCGGTGCTGTGGCCACTGCGGCGAATCCGTTCTACACTGCTGACGAGATCTTCAAGCAGTTCCGTGCGGCGAAAGCGAAACTGATTGTCACCCAATCGGCTTACGTTAGCAAGCTCCGAGATCACCAGGCCGGCGTGGACATCGGAGAGGATCAGCTTAAGGTGATCACCGTCGATGATCCGCCAGAGAAGTGCATGCATTTCTCGGTGGTGTCGGAGGCCGACGAGAATGAGGTGCCGGAGGTGGAGATCGACCCGGACGATCCTGTGGCTCTACCGTTCTCTTCTGGAACGACAGGGTTGCCGAAGGGCGTGATTCTGACGCACAAGAGCTTAACGACGAGCGTGGCGCAACAGGTCGACGGCGAGAATCCGAACCTGTACCTGAAACCAGACGACGTGTTGCTCTGCGTGCTTCCTCTGTTTCACATATTCTCTCTCAACAGCGTGTTGTTGTGCGCTCTGAGGGCGGGAAGTGCGGTGTTGCTGATGCACAAGTTCGAGATAGGGGCGTTGCTGGAACTGACGCAACGGCATAAGGTGTCGGTGGCGATGGTGGTGCCGCCCCTGGTGCTGGCGCTGGCAAAGAATCCGATGGTGGCGGACTTCGATCTGAGCTCGATAAGGCTGGTGCTGTCAGGGGCGGCGCCGCTTGGGAAGGAGCTGGAGGACGCTCTAAGAAGCAGAGTGCCTCAGGCCGTTTTGGGTCAGGGGTACGGAATGACAGAGGCAGGGCCTGTGTTGTCAATGTGCCTCGGCTTTGCAAAAGAGGCATTCACAACAAAGTCGGGGTCGTGTGGCACAGTCGTCAGAAATGCGGAGCTCAAAGTGGTTGATCCTGAATCTGGTCGCTCTCTTGGCTATAACCAGCCTGGTGAGATTTGCATTCGAGGCTACCAAATCATGAAAGGATATCTGAATGATGAGAAGGCGACAGCTGCAACAATAGATGCAGAGGGATGGCTTCACACAGGGGATATTGGGTATGTAGACGAAGACGACGAGATCTTCATTGTCGACAGAGTTAAGGAGCTCATCAAGTTCAAAGGCTTCCAGGTGCCACCAGCTGAACTTGAAGGCCTTCTTGTAAGTCACCCTTCCATTGCAGACGCAGCTGTCGTGCCGCAAAAGGATGAGGTTGCCGGTGAAGTTCCAGTTGCTTTTATTGTAAGGTCAAATGGCTTTGACCTTACTGAAGAGGCTGTAAAGGAATTCATAGCTAAACGGGTAGTGTTTTACAAAAGATTGCACAAAGTGTACTTCGTTCATGCAATTCCCAAGTCTCCATCTGGGAAGATATTGAGAAAAGATCTGAGAGCAAAGCTAGAGGGCAACAACACCCAAACGCCTTGA 1725 0.5188 MISVESHQNPGLSSPPSPKPAPNDSNSADSPQTTHIFKSKLPDIPISNHLPLHTYCFENLSQFADRPCLIVGSTGKIYSYAETHLQSRKIAAGFSKLGIKKGDVIMILLQNSAEFALSFFAASMIGAVATAANPFYTADEIFKQFRAAKAKLIVTQSAYVSKLRDHQAGVDIGEDQLKVITVDDPPEKCMHFSVVSEADENEVPEVEIDPDDPVALPFSSGTTGLPKGVILTHKSLTTSVAQQVDGENPNLYLKPDDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGALLELTQRHKVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEDALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKEAFTTKSGSCGTVVRNAELKVVDPESGRSLGYNQPGEICIRGYQIMKGYLNDEKATAATIDAEGWLHTGDIGYVDEDDEIFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKDEVAGEVPVAFIVRSNGFDLTEEAVKEFIAKRVVFYKRLHKVYFVHAIPKSPSGKILRKDLRAKLEGNNTQTP 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0118 574 Gene3D - 467 570 IPR045851 -
Prci7g0118 574 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Prci7g0118 574 Gene3D - 27 466 IPR042099 -
Prci7g0118 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 38 467 - -
Prci7g0118 574 MobiDBLite consensus disorder prediction 1 34 - -
Prci7g0118 574 FunFam 4-coumarate--CoA ligase 2 468 569 - -
Prci7g0118 574 SUPERFAMILY Acetyl-CoA synthetase-like 43 568 - -
Prci7g0118 574 Pfam AMP-binding enzyme C-terminal domain 481 556 IPR025110 -
Prci7g0118 574 CDD 4CL 46 562 - -
Prci7g0118 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 32 564 - -
Prci7g0118 574 Pfam AMP-binding enzyme 58 472 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0118 Prci-Chr7 8568074 8575524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0118 11 479 Monolignol Biosynthesis Gene Families AT1G65060 70.168 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0118 K01904 - gmx:547492 915.22