Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0094 ATGGGACGTTCGCCTTGTTGTGAGAAAGCGCACACGAACAAAGGCGCTTGGACCAAAGAGGAAGACCAACGCCTTATCGATTATATTCGCCTCCACGGGGAAGGTTCTTGGCGTTCTCTCCCAAAAGCTGCTGGATTGCTCAGGTGCGGGAAGAGCTGCAGATTGAGATGGATAAACTACCTTCGTCCTGATCTAAAACGAGGAAATTTCACCCAAGAAGAAGACGACCTCATCATCAAGCTTCATAGTTTACTCGGAAACAAATGGTCTCTGATTGCGGCGAGATTGCCTGGTAGAACCGATAATGAGATAAAGAATTATTGGAATACTCATATAAAGCGCAAGCTCATCAGCCGCGGAATCAATCCGCAAACGCACCGTCCTCTCAACGACACCACCGTCTCTGTAAAATCCGCCACCAAGTGGGACTTCAAGACCTCGCCGGCGGGGGAAAACGACTTCACCGAGAAGATGCAGAAGCAGAAGCGGCAGAGTGATAGTTTTCAACTGCATCAATTTCAGCAGCATCAAGGCCATTGA 540 0.4889 MGRSPCCEKAHTNKGAWTKEEDQRLIDYIRLHGEGSWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTQEEDDLIIKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLISRGINPQTHRPLNDTTVSVKSATKWDFKTSPAGENDFTEKMQKQKRQSDSFQLHQFQQHQGH 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0094 179 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Prci7g0094 179 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Prci7g0094 179 CDD SANT 69 112 IPR001005 -
Prci7g0094 179 FunFam MYB-related transcription factor 13 66 - -
Prci7g0094 179 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Prci7g0094 179 CDD SANT 16 61 IPR001005 -
Prci7g0094 179 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 161 - -
Prci7g0094 179 MobiDBLite consensus disorder prediction 165 179 - -
Prci7g0094 179 Gene3D - 69 116 - -
Prci7g0094 179 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Prci7g0094 179 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Prci7g0094 179 MobiDBLite consensus disorder prediction 142 179 - -
Prci7g0094 179 SMART sant 13 63 IPR001005 -
Prci7g0094 179 SMART sant 66 114 IPR001005 -
Prci7g0094 179 FunFam Myb transcription factor 68 137 - -
Prci7g0094 179 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Prci7g0094 179 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Prci7g0094 179 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0094 Prci-Chr7 7758165 7759626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0094 1 138 MYB Transcription Factor Family AT4G38620 84.058 7.39e-88 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci7g0094 Myb_DNA-binding 1.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0094 K09422 - bvg:104895550 277.33