Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0090 ATGGCTGCGGCTTCTATTCTGGCCATACCCTCTCACATGAAAGCTTGGGTCTATTCTGAGTATGGCAACTCATCTGAAGTTCTCCATTTGGTCGAATTTGCTTTACCTCAACTCAGCCATGATCAGGTTCTCCTCAAAGTCTCCGCCGCTTCCCTCAATCCCATTGACTACAAGAGGATGGGTGGCTTCTTCAAGGACACCGACTCTCCTTTACCTACTGTTCCTGGATATGATGTTGCTGGTGTAGTGGTGAAAGTAGGAAGTGCAGTGAAGAAATTTAAGATTGGGGATGAAGTGTATGGTGACCTTAATGAGAAAGCCTTGGATCACCCAATGGTGGTTGGGTCTCTGGCAGAGTACACTGCTGTAGAAGAGAAACTACTAGCCCATAAACCTCCAAATCTGAGCTTTGTTGAGGCTGCTAGCATTCCTTTAGCTCTGGAGACTGCTTATGAAGGGCTCGAGCGTGCCGGCTTTTCAGATGGAAAATCCATCCTTGTTCTGGGTGGTGCTGGTGGAGTTGGAACCTTTGTTATCCAGCTTGCCAAACATGTTTATGGCGCATCGAAAATAGCAGCAACTTCTAGCACTAAAAAATTGGAATTGTTGAGGAACTTGGGTGCTGATTTACCTATTGACTATACAAAGGAGAAATATGAGGATCTGGCAGAAAAGTTTGATGTAGTGTTTGATGCAGTAGGAGAGACTGAACGGGCATTCAAGGCTATTAAAGAAGGAGGCAAAGTGGTATCAATAGTACCGCTTGCTGGAATTCCACCGACAATTATGTTCATACTAACATCAGATGGAGCTAGTTTAGAAAAGTTAAGACCTTACATTGAGAACGGCAAGGTGAAGCCAATACTGGATCCGAAGAGTCCATTTCCATTTTCTCAGACGACGGAAGCATTTGCCCACCTGGAATCTAATAGAGCCACTGGAAAAATAGTAGTCTACCCTATTCCATGA 969 0.4469 MAAASILAIPSHMKAWVYSEYGNSSEVLHLDXEFALPQLSHDQVLLKVSAASLNPIDYKRMGGFFKDTDSPLPTVPGYDVAGVVVKVGSAVKKFKIGDEVYGDLNEKALDHPMVVGSLAEYTAVEEKLLAHKPPNLSFVEAASIPLALETAYEGLERAGFSDGKSILVLGGAGGVGTFVIQLAKHVYGASKIAATSSTKKLELLRNLGADLPIDYTKEKYEDLAEKFDVVFDAVGETERAFKAIKEGGKVVSIVPLAGIPPTIMFILTSDGASLEKLRPYIENGKVKPILDPKSPFPFSQTTEAFAHLESNRATGKIVVYPIP 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0090 323 Pfam Alcohol dehydrogenase GroES-like domain 42 103 IPR013154 -
Prci7g0090 323 Gene3D - 155 270 - -
Prci7g0090 323 Pfam Zinc-binding dehydrogenase 207 319 - -
Prci7g0090 323 SUPERFAMILY GroES-like 10 170 IPR011032 -
Prci7g0090 323 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 163 184 IPR002364 GO:0008270|GO:0016491
Prci7g0090 323 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 323 IPR044626 GO:0016628
Prci7g0090 323 CDD MDR_like_2 13 319 - -
Prci7g0090 323 Gene3D - 20 319 - -
Prci7g0090 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 136 289 IPR036291 -
Prci7g0090 323 SMART PKS_ER_names_mod 23 319 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0090 Prci-Chr7 7513400 7515660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0090 73 238 Monolignol Biosynthesis Gene Families AT4G37980 26.943 1.10e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0090 K18980 - gmx:100817947 477.248