Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0068 ATGGAACCGACTTCTGAAGGTAGCGGCGGAGGCGGTGGTGATTGTGGTGAGCTTTCTCGGTTCCGTTCAACTCCGGCCACGTGGTTAGAAGCACTGCTCAAGGAGGAGGACGAAGAAGACCCATTGGATACCACCCAGTGCTTCACTCAGCTTCTCGCTACAGGTACTGATAACTTGTCCAGAAATACGGCGTCTTTCGATTCGCCGGCGGCTGATGGATGCGGTTTTGATGCTGGGTCATCGTCAGGTGGATTTACCCGGCAGAATAGTTCTCCGGCGAACTTATTCGGGAATTCAATGGTTGTTGCCTCTGAAACAAGGTACTTCTCCAAGTATGGGGTTCAACACAATCATGACGTTAGCCCCCAAGATATCGATGCTTCCTCCATATCTAATTTGACACCAGTTAGACAGAATGTTGAGCATACTGGCAAAGCACCAGACATGGACATAGAGAAGATTTTAGAGGATTCGGTACCTTGCAGAGTTCGGGCAAAGCGTGGCCATGCGACACATCCAAGGAGCATTGCTGAGAGGGTTCGTAGAACTCGGATAAGTGATCGCATACGGAAGCTTCAAGAACTTGTGCCAAACATGGATAAGCAAACCAACACTGCAGAAATGTTAGACGAGGCTGTAGCATATGTCAAGTCTCTGCAGAAGCAAATCGAGGAACTCACAGAGCAACAACGAAAATGTAAATGCGTTCAAGAGTAA 717 0.4854 MEPTSEGSGGGGGDCGELSRFRSTPATWLEALLKEEDEEDPLDTTQCFTQLLATGTDNLSRNTASFDSPAADGCGFDAGSSSGGFTRQNSSPANLFGNSMVVASETRYFSKYGVQHNHDVSPQDIDASSISNLTPVRQNVEHTGKAPDMDIEKILEDSVPCRVRAKRGHATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKSLQKQIEELTEQQRKCKCVQE 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0068 238 FunFam Transcription factor bHLH130 family 170 238 - -
Prci7g0068 238 Gene3D - 166 238 IPR036638 GO:0046983
Prci7g0068 238 Pfam Helix-loop-helix DNA-binding domain 174 220 IPR011598 GO:0046983
Prci7g0068 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 235 IPR036638 GO:0046983
Prci7g0068 238 MobiDBLite consensus disorder prediction 1 20 - -
Prci7g0068 238 Coils Coil 209 238 - -
Prci7g0068 238 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 78 233 - -
Prci7g0068 238 SMART finulus 175 225 IPR011598 GO:0046983
Prci7g0068 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 169 219 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0068 Prci-Chr7 6453042 6459309 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0068 20 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 48.523 5.99e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci7g0068 HLH 1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0068 - - pcin:129315765 414.075