Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0066 ATGGAACCGACTTCTGAAGGTAGCGGCGGAGGCGGTGGTGATTGTGGTGAGCTTTCTCGGTTCCGTTCAACTCCGGCCACGTGGTTAGAAGCACTGCTCAAGGAGGAGGACGAAGAAGACCCATTGGATACCACCCAGTGCTTCACTCAGCTTCTCGCTACAGGTGGATTTACCCGGCAGAATAGTTCTCCGGCGAACTTATTCGGGAATTCAATGGTTGTTGCCTCTGAAACAAGGTACTTCTCCAAGTATGGGGTTCAACACAATCATGACGTTAGCCCCCAAGATATCGATGCTTCCTCCATATCTAATTTGACACCAGTTAGACAGAATGTTGAGCATACTGGCAAAGCACCAGACATGGACATAGAGAAGATTTTAGAGGATTCGGTACCTTGCAGAGTTCGGGCAAAGCGTGGCCATGCGACACATCCAAGGAGCATTGCTGAGAGGGTTCGTAGAACTCGGATAAGTGATCGCATACGGAAGCTTCAAGAACTTGTGCCAAACATGGATAAGCAAACCAACACTGCAGAAATGTTAGACGAGGCTGTAGCATATGTCAAGTCTCTGCAGAAGCAAATCGAGCATTGCAGGAACTCACAGAGCAACAACGAAAATGTAAATGCGTTCAAGAGTAAATTGGCCTTGATGTGTTATGCTGTGAATTATCTGACTCTTGTTTGGTTAAAAGACCATTCAAGCATATCGGCTTCTGACGGTGTTTCTGCATTCTCTCAAATGGATACCTTAAGATTTTCAGTTTGTGACACATTCTTCTGCAATATATTGGCTAGACACTACCATGATCTGTGA 816 0.4596 MEPTSEGSGGGGGDCGELSRFRSTPATWLEALLKEEDEEDPLDTTQCFTQLLATGGFTRQNSSPANLFGNSMVVASETRYFSKYGVQHNHDVSPQDIDASSISNLTPVRQNVEHTGKAPDMDIEKILEDSVPCRVRAKRGHATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTNTAEMLDEAVAYVKSLQKQIEHCRNSQSNNENVNAFKSKLALMCYAVNYLTLVWLKDHSSISASDGVSAFSQMDTLRFSVCDTFFCNILARHYHDL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0066 271 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 191 IPR011598 GO:0046983
Prci7g0066 271 MobiDBLite consensus disorder prediction 1 20 - -
Prci7g0066 271 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 140 199 IPR036638 GO:0046983
Prci7g0066 271 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 202 - -
Prci7g0066 271 FunFam Transcription factor bHLH130 family 142 210 - -
Prci7g0066 271 SMART finulus 147 197 IPR011598 GO:0046983
Prci7g0066 271 Gene3D - 138 215 IPR036638 GO:0046983
Prci7g0066 271 Pfam Helix-loop-helix DNA-binding domain 146 192 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0066 Prci-Chr7 6453039 6459743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0066 51 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 50.000 1.15e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci7g0066 HLH 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0066 - - pcin:129315765 496.123