Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci7g0064 ATGGAATCCTGCAACTGTATTGAGCCACCACCAGGAGATGAATTGTTGATGAAATACCAATATATTTCAGATTTCTTCATCGCCCTTGCTTATTTTTCAATCCCTCTAGAACTGATCTACTTTGTAAAGAAATCAGCTGTATTTCCATATCGATGGGTCCTTGTTCAGTTTGGTGCTTTCATTGTTCTATGTGGAGCAACACACCTAATAAATTTATGGACCTTCACAGTGCATTCAAAAACTGTAGCTGTAGTAATGACCACTGCTAAGGTTTTAACTGCTGTGGTATCATGTGCGACTGCCCTTTTGCTTGTACATATCATTCCTGATTTATTGAGTGTTAAGACCAGAGAGCTATTTTTGAAGAATAAGGCTGCAGAGCTGGATAGGGAAATGGGCTTGATTCGCACACAAGAAGAAACTGGCCGACATGTTAGGATGCTGACTCATGAGATTAGAAGCACTCTGGATCGGCACACCATACTTAAAACAACTCTTGTTGAACTGGGTAGAACTTTGGCACTGGAGGAGTGTGCATTATGGATGCCAACACGTACTGGGTTGGAGCTTCAACTTTCCTACACATTGCGACAGCAAAACCCAGTTGGATATACAGTACCCATCCATCTCCCTGTGATCAATCAAGTATTTAGTACCAACCGGGCTGTCAAAATTTCACCAAACTGCCCTGTAGCCAGATTACGACCTCATGCAGGAAAATACATGCCTGGGGAAGTTGTTGCTGTTCGAGTGCCCCTTCTGCATCTTTCTAATTTCCAAATTTATGATTGGCCGGCAGTTTCATCAAGCTATGCTTTGATGGTCTTGATGCTACCATCAGATAGTGCGAGACAGTGGCATCTCTATGAGCTAGAGCTGGTTGAGGTTGTTGCTGATCAGGTAGCTGTTGCTCTTTCCCATGCTGCAATTCTAGAAGAGTCAATGAGGGCAAGGGATCAGCTTATGGAGCAAAATGTTGCACTTGATCTGGCAAGAAGAGAAGCAGAGACTGCAATTCGTGCTCGCAATGATTTTTTGGCTGTAATGAATCACGAGATGAGGACTCCCATGCATGCAATTATTGCACTCTCCTCATTGTTACAAGAAACAGAGCTGACACCTGAGCAGCGTTTGATGGTTGAGACCGTACTGAAAAGTAGTAATCTATTGGCTACTCTTATCAATGACGTTTTAGATCTTTCACGTCTTGAAGATGGCAGCCTTCAACTTGATGCAGCAACATTCAACCTTCATTCTATGTTCAGAGAGGTCTTTAACTTGATTAAACCTGTTGCATCTGTCAAAAAGTTGTCACTCACTTTACATTTAGCTCCAGACTTGCCAGTGTATGCTATTGGTGATGAAAAACGCCTCATGCAAACTATTCTCAATGTAGTTGGTAATGCTGTTAAGTTCTCGAAAGAGGGTGGTGTCTCATTCACTGCTTCTGTTTTAAAAGTTGAATCCTTTAGGGATTCTAGATTTCCGGACTTTATACCAGTGCTTAATGATAATCAATTTTATTTACAAGTACAGGTAAAAGATTCAGGATCAGGAATTAATCCACAGGATATACCTACATTATTTACTAAATTTGCGCAAACCCAATCTTCAACAGCAAGAAATTCTGGTGGCAATGGACTTGGCCTCGCAATTTGTAAGAGGTTTGTAAACCTTATGGAGGGGCATATTTGGATTGATAGTGAAGGTAGTGGTAAGGGGTGTACAGCTACCTTTATTGTAAAACTTGGAATCCCTGATCGATCAAATGAATCTAAAGCCCCCTTTGTACACAAGGTTCTGGGAAATCATGGCCCCACAAACTTTGCAGGGCTCAAGGTTCTGGTCTTGGATGATAATGGGGTTAGCAGGACAGTGACGAAGGGACTGCTTGTGCATTTAGGGTGTGATGTTACAACAGCAAGCTCAAGTGAAGAATGCTTACGTGTTGTTTCTCATGAACACAAGGTGATCTTCATGGATGTATGTTCAGGTATAATAGATGGCTATGATCTTGCGGTACGTATCCATGAGAAGTTTACCAAACGACAAGAAAGGCCACTTATTGTTGCTCTGACTGGAAACACTAACAAAGTCACAAAAGAAAACTGTGTGAGGGTTGGAATGGATGGCCTCGTATTGAAACCTGTTTCTGTTGATAAGATGAGGGGTGTTTTGTCTGAACTACTGGAGCACCGAGTTTTGTTTGAATCCATTTAA 2220 0.4176 MESCNCIEPPPGDELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTVHSKTVAVVMTTAKVLTAVVSCATALLLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIHLPVINQVFSTNRAVKISPNCPVARLRPHAGKYMPGEVVAVRVPLLHLSNFQIYDWPAVSSSYALMVLMLPSDSARQWHLYELELVEVVADQVAVALSHAAILEESMRARDQLMEQNVALDLARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETVLKSSNLLATLINDVLDLSRLEDGSLQLDAATFNLHSMFREVFNLIKPVASVKKLSLTLHLAPDLPVYAIGDEKRLMQTILNVVGNAVKFSKEGGVSFTASVLKVESFRDSRFPDFIPVLNDNQFYLQVQVKDSGSGINPQDIPTLFTKFAQTQSSTARNSGGNGLGLAICKRFVNLMEGHIWIDSEGSGKGCTATFIVKLGIPDRSNESKAPFVHKVLGNHGPTNFAGLKVLVLDDNGVSRTVTKGLLVHLGCDVTTASSSEECLRVVSHEHKVIFMDVCSGIIDGYDLAVRIHEKFTKRQERPLIVALTGNTNKVTKENCVRVGMDGLVLKPVSVDKMRGVLSELLEHRVLFESI 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci7g0064 739 Pfam His Kinase A (phospho-acceptor) domain 342 406 IPR003661 GO:0000155|GO:0007165
Prci7g0064 739 SUPERFAMILY GAF domain-like 157 317 - -
Prci7g0064 739 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 327 407 IPR036097 GO:0000155|GO:0007165
Prci7g0064 739 Pfam GAF domain 157 305 IPR003018 GO:0005515
Prci7g0064 739 CDD REC_ETR-like 612 726 - -
Prci7g0064 739 SMART gaf_1 157 315 IPR003018 GO:0005515
Prci7g0064 739 CDD HisKA 339 402 IPR003661 GO:0000155|GO:0007165
Prci7g0064 739 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 453 583 IPR003594 -
Prci7g0064 739 Gene3D - 307 405 - -
Prci7g0064 739 ProSiteProfiles Response regulatory domain profile. 613 730 IPR001789 GO:0000160
Prci7g0064 739 PIRSF Ethylen_sen_hybr_HK 1 737 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Prci7g0064 739 FunFam Ethylene receptor 606 739 - -
Prci7g0064 739 ProSiteProfiles Histidine kinase domain profile. 348 587 IPR005467 -
Prci7g0064 739 Gene3D - 607 739 - -
Prci7g0064 739 FunFam Ethylene receptor 1 406 588 - -
Prci7g0064 739 SMART HKATPase_4 453 585 IPR003594 -
Prci7g0064 739 Pfam Response regulator receiver domain 614 723 IPR001789 GO:0000160
Prci7g0064 739 Gene3D - 135 306 IPR029016 -
Prci7g0064 739 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 732 - -
Prci7g0064 739 FunFam Ethylene response sensor 135 306 - -
Prci7g0064 739 FunFam Ethylene receptor 1 308 404 - -
Prci7g0064 739 SMART REC_2 612 726 IPR001789 GO:0000160
Prci7g0064 739 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 395 583 IPR036890 -
Prci7g0064 739 SUPERFAMILY CheY-like 608 731 IPR011006 -
Prci7g0064 739 SMART HisKA_10 341 406 IPR003661 GO:0000155|GO:0007165
Prci7g0064 739 Gene3D - 406 590 IPR036890 -
Prci7g0064 739 PRINTS Bacterial sensor protein C-terminal signature 527 537 IPR004358 GO:0016310|GO:0016772
Prci7g0064 739 PRINTS Bacterial sensor protein C-terminal signature 509 523 IPR004358 GO:0016310|GO:0016772
Prci7g0064 739 PRINTS Bacterial sensor protein C-terminal signature 544 562 IPR004358 GO:0016310|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci7g0064 Prci-Chr7 6270713 6277785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci7g0064 1 739 Miscellaneous Gene Families AT1G66340 81.267 0.0 1223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci7g0064 GAF 2.2e-14 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci7g0064 K14509 - gmx:100795799 1295.03